KEGG   PATHWAY: dhe03420
Entry
dhe03420                    Pathway                                
Name
Nucleotide excision repair - Drosophila hydei
Description
Nucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the NER pathway are linked to at least three diseases: xeroderma pigmentosum (XP), Cockayne syndrome (CS), and trichothiodystrophy (TTD). The repair of damaged DNA involves at least 30 polypeptides within two different sub-pathways of NER known as transcription-coupled repair (TCR-NER) and global genome repair (GGR-NER). TCR refers to the expedited repair of lesions located in the actively transcribed strand of genes by RNA polymerase II (RNAP II). In GGR-NER the first step of damage recognition involves XPC-hHR23B complex together with XPE complex (in prokaryotes, uvrAB complex). The following steps of GGR-NER and TCR-NER are similar.
Class
Genetic Information Processing; Replication and repair
Pathway map
dhe03420  Nucleotide excision repair
dhe03420

Other DBs
GO: 0006289
Organism
Drosophila hydei [GN:dhe]
Gene
111592541  [KO:K10756]
111592628  [KO:K10756]
111592865  [KO:K03142]
111593196  [KO:K03013]
111593245  [KO:K03010] [EC:2.7.7.6]
111593328  [KO:K10755]
111593534  [KO:K10847]
111593598  [KO:K04802]
111593682  [KO:K03007]
111593709  [KO:K10839]
111594352  [KO:K04802]
111594369  [KO:K03144]
111594632  [KO:K10610]
111594718  [KO:K10739]
111594843  [KO:K02325] [EC:2.7.7.7]
111595203  [KO:K03008]
111595244  [KO:K03506] [EC:2.7.7.7]
111595734  [KO:K10754]
111596037  [KO:K10755]
111596855  [KO:K02328]
111597091  [KO:K10844] [EC:5.6.2.3]
111597262  [KO:K02202] [EC:2.7.11.22 2.7.11.23]
111597445  [KO:K06634]
111598012  [KO:K10849]
111598094  [KO:K02327] [EC:2.7.7.7]
111598658  [KO:K02324] [EC:2.7.7.7]
111599095  [KO:K03143]
111599766  [KO:K03015]
111599771  [KO:K10843] [EC:5.6.2.4]
111599954  [KO:K10848] [EC:3.1.-.-]
111600271  [KO:K03143]
111600403  [KO:K03011]
111600644  [KO:K03141]
111600720  [KO:K10609]
111600890  [KO:K10838]
111600961  [KO:K03016]
111601088  [KO:K03868] [EC:2.3.2.32]
111602241  [KO:K03504]
111602582  [KO:K03009]
111602617  [KO:K03017]
111602844  [KO:K10740]
111603518  [KO:K03868] [EC:2.3.2.32]
111603640  [KO:K21987]
111603752  [KO:K10845]
111603946  [KO:K10846]
111603960  [KO:K02326] [EC:2.7.7.7]
111604092  [KO:K10842]
111604779  [KO:K03868] [EC:2.3.2.32]
111604932  [KO:K03014]
111605125  [KO:K03868] [EC:2.3.2.32]
111605338  [KO:K03006] [EC:2.7.7.6]
111605428  [KO:K07466]
115483461  [KO:K10843] [EC:5.6.2.4]
Reference
  Authors
Sugasawa K.
  Title
[Molecular mechanism of mammalian nucleotide excision repair]
  Journal
Tanpakushitsu Kakusan Koso 46:893-901 (2001)
Reference
  Authors
Nakatsu Y.
  Title
[Transcription-coupled repair and Cockayne syndrome]
  Journal
Tanpakushitsu Kakusan Koso 46:908-15 (2001)
Reference
  Authors
Nakagawa N, Masui R, Kuramitsu S.
  Title
[Structure and function of DNA repair enzyme UvrB from Thermus thermophilus HB8]
  Journal
Tanpakushitsu Kakusan Koso 46:968-75 (2001)
Reference
  Authors
Kraemer KH, Patronas NJ, Schiffmann R, Brooks BP, Tamura D, DiGiovanna JJ.
  Title
Xeroderma pigmentosum, trichothiodystrophy and Cockayne syndrome: a complex genotype-phenotype relationship.
  Journal
Neuroscience 145:1388-96 (2007)
DOI:10.1016/j.neuroscience.2006.12.020
Reference
  Authors
Saldivar JS, Wu X, Follen M, Gershenson D.
  Title
Nucleotide excision repair pathway review I: implications in ovarian cancer and platinum sensitivity.
  Journal
Gynecol Oncol 107:S56-71 (2007)
DOI:10.1016/j.ygyno.2007.07.043
Reference
  Authors
Sugasawa K.
  Title
[DNA repair pathways involving Cul4A ubiquitin ligases]
  Journal
Tanpakushitsu Kakusan Koso 51:1339-44 (2006)
Reference
  Authors
Ito S, Ando D, Tanaka K.
  Title
[Cross-talk between DNA repair and transcription: molecular mechanism and disorders]
  Journal
Tanpakushitsu Kakusan Koso 52:1823-31 (2007)
Related
pathway
dhe03020  RNA polymerase
dhe04120  Ubiquitin mediated proteolysis
KO pathway
ko03420   

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