KEGG   PATHWAY: don00630
Entry
don00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Marivivens sp. JLT3646
Class
Metabolism; Carbohydrate metabolism
Pathway map
don00630  Glyoxylate and dicarboxylate metabolism
don00630

Module
don_M00373  Ethylmalonyl pathway [PATH:don00630]
don_M00621  Glycine cleavage system [PATH:don00630]
don_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:don00630]
Other DBs
GO: 0046487 0043648
Organism
Marivivens sp. JLT3646 [GN:don]
Gene
BSK21_15280  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BSK21_03925  malate synthase G [KO:K01638] [EC:2.3.3.9]
BSK21_11450  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BSK21_07505  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BSK21_05995  aconitate hydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
BSK21_01795  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_15340  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_09265  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_05865  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_04065  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_15095  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_13160  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSK21_01800  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
BSK21_10585  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
BSK21_00885  crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
BSK21_12085  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
BSK21_00875  protein meaA [KO:K14447] [EC:5.4.99.63]
BSK21_01045  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
BSK21_11425  hypothetical protein [KO:K14449] [EC:4.2.1.148]
BSK21_02035  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
BSK21_11440  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
BSK21_08375  acetyl/propionyl-CoA carboxylase subuit alpha [KO:K01965] [EC:6.4.1.3]
BSK21_08400  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BSK21_08360  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BSK21_03935  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
BSK21_03940  hypothetical protein [KO:K11472] [EC:1.1.99.14]
BSK21_03945  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
BSK21_11210  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
BSK21_11050  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BSK21_01365  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BSK21_04590  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
BSK21_05440  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BSK21_08675  phosphatase [KO:K01091] [EC:3.1.3.18]
BSK21_03235  septum site-determining protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BSK21_14515  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BSK21_06030  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BSK21_02685  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BSK21_02695  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BSK21_07845  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BSK21_03985  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BSK21_10410  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
BSK21_10420  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
BSK21_11485  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSK21_05030  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSK21_10415  glycine cleavage system protein H [KO:K02437]
BSK21_08135  glycerate kinase [KO:K11529] [EC:2.7.1.165]
BSK21_05300  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BSK21_02385  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
BSK21_02375  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
BSK21_02370  formate dehydrogenase [KO:K00124]
BSK21_02365  formate dehydrogenase subunit gamma [KO:K00127]
BSK21_02930  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BSK21_09500  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
don00010  Glycolysis / Gluconeogenesis
don00020  Citrate cycle (TCA cycle)
don00030  Pentose phosphate pathway
don00053  Ascorbate and aldarate metabolism
don00071  Fatty acid degradation
don00230  Purine metabolism
don00250  Alanine, aspartate and glutamate metabolism
don00260  Glycine, serine and threonine metabolism
don00620  Pyruvate metabolism
don00710  Carbon fixation by Calvin cycle
don00750  Vitamin B6 metabolism
don00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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