KEGG   PATHWAY: gbz00230
Entry
gbz00230                    Pathway                                
Name
Purine metabolism - Geobacter benzoatilyticus
Class
Metabolism; Nucleotide metabolism
Pathway map
gbz00230  Purine metabolism
gbz00230

Module
gbz_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gbz00230]
gbz_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gbz00230]
gbz_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gbz00230]
gbz_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gbz00230]
Other DBs
GO: 0006163 0042278
Organism
Geobacter benzoatilyticus [GN:gbz]
Gene
JZM60_06015  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
JZM60_02110  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
JZM60_13605  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
JZM60_02395  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
JZM60_14060  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
JZM60_13610  phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
JZM60_13615  phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23270] [EC:6.3.5.3]
JZM60_14055  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
JZM60_02390  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
JZM60_10580  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
JZM60_13625  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
JZM60_02400  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
JZM60_12495  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
JZM60_06410  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
JZM60_12480  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
JZM60_13305  HAD hydrolase-like protein [KO:K20881] [EC:3.1.3.-]
JZM60_14640  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
JZM60_06175  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
JZM60_09935  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
JZM60_15580  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
JZM60_10065  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
JZM60_14240  XTP/dITP diphosphatase [KO:K01519] [EC:3.6.1.66]
JZM60_15575  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
JZM60_15785  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
JZM60_11775  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
JZM60_14715  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
JZM60_15775  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
JZM60_00545  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JZM60_13975  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JZM60_14380  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
JZM60_04310  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
JZM60_16420  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
JZM60_08865  adenylate kinase [KO:K00939] [EC:2.7.4.3]
JZM60_16100  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
JZM60_13345  HIT domain-containing protein [KO:K19710] [EC:2.7.7.53]
JZM60_14465  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
JZM60_14470  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
gbz00030  Pentose phosphate pathway
gbz00220  Arginine biosynthesis
gbz00250  Alanine, aspartate and glutamate metabolism
gbz00260  Glycine, serine and threonine metabolism
gbz00340  Histidine metabolism
gbz00630  Glyoxylate and dicarboxylate metabolism
gbz00730  Thiamine metabolism
gbz00740  Riboflavin metabolism
gbz00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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