KEGG   PATHWAY: gja00970
Entry
gja00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Gekko japonicus (Schlegel's Japanese gecko)
Class
Genetic Information Processing; Translation
Pathway map
gja00970  Aminoacyl-tRNA biosynthesis
gja00970

Organism
Gekko japonicus (Schlegel's Japanese gecko) [GN:gja]
Gene
26044423  APQ53_gt08; tRNA-Ala [KO:K14218]
26044409  APQ53_gt16; tRNA-Arg [KO:K14219]
26044424  APQ53_gt09; tRNA-Asn [KO:K14220]
26044428  APQ53_gt13; tRNA-Asp [KO:K14221]
26044425  APQ53_gt10; tRNA-Cys [KO:K14222]
26044420  APQ53_gt05; tRNA-Gln [KO:K14223]
26044413  APQ53_gt20; tRNA-Glu [KO:K14224]
26044408  APQ53_gt15; tRNA-Gly [KO:K14225]
26044411  APQ53_gt17; tRNA-His [KO:K14226]
26044402  APQ53_gt04; tRNA-Ile [KO:K14227]
26044418  APQ53_gt03; tRNA-Leu [KO:K14228]
26044434  APQ53_gt19; tRNA-Leu [KO:K14228]
26044405  APQ53_gt14; tRNA-Lys [KO:K14229]
26044421  APQ53_gt06; tRNA-Met [KO:K14230]
26044438  APQ53_gt01; tRNA-Phe [KO:K14231]
26044437  APQ53_gt22; tRNA-Pro [KO:K14232]
26044404  APQ53_gt12; tRNA-Ser [KO:K14233]
26044433  APQ53_gt18; tRNA-Ser [KO:K14233]
26044414  APQ53_gt21; tRNA-Thr [KO:K14234]
26044403  APQ53_gt07; tRNA-Trp [KO:K14235]
26044426  APQ53_gt11; tRNA-Tyr [KO:K14236]
26044416  APQ53_gt02; tRNA-Val [KO:K14237]
107126210  EARS2; glutamyl-tRNA synthetase 2, mitochondrial [KO:K01885] [EC:6.1.1.17]
107122302  EPRS; glutamyl-prolyl-tRNA synthetase [KO:K14163] [EC:6.1.1.17 6.1.1.15]
107120665  QRSL1; glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [KO:K02433] [EC:6.3.5.6 6.3.5.7]
107108578  GATB; glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
107126080  GATC; glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
107119600  QARS; glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
107115261  AARS2; alanyl-tRNA synthetase 2, mitochondrial [KO:K01872] [EC:6.1.1.7]
107121801  AARS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
107115412  DARS; aspartyl-tRNA synthetase [KO:K22503] [EC:6.1.1.12]
107109868  DARS2; aspartyl-tRNA synthetase 2, mitochondrial [KO:K01876] [EC:6.1.1.12]
107111201  NARS; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
107116987  probable asparagine--tRNA ligase, mitochondrial [KO:K01893] [EC:6.1.1.22]
107122396  GARS; glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
107109463  TARS2; threonyl-tRNA synthetase 2, mitochondrial (putative) [KO:K01868] [EC:6.1.1.3]
107119903  TARS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
107112106  probable threonine--tRNA ligase 2, cytoplasmic [KO:K01868] [EC:6.1.1.3]
107111189  SARS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
107121994  SARS2; seryl-tRNA synthetase 2, mitochondrial [KO:K01875] [EC:6.1.1.11]
107116290  PSTK; phosphoseryl-tRNA kinase [KO:K10837] [EC:2.7.1.164]
107115130  SEPSECS; Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [KO:K03341] [EC:2.9.1.2]
107110342  CARS2; cysteinyl-tRNA synthetase 2, mitochondrial (putative) [KO:K01883] [EC:6.1.1.16]
107122761  CARS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
107106063  MARS2; methionyl-tRNA synthetase 2, mitochondrial [KO:K01874] [EC:6.1.1.10]
107118954  MARS; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
107123800  methionyl-tRNA formyltransferase, mitochondrial-like [KO:K00604] [EC:2.1.2.9]
107115233  VARS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
107117333  VARS2; valyl-tRNA synthetase 2, mitochondrial [KO:K01873] [EC:6.1.1.9]
107111303  LARS2; leucyl-tRNA synthetase 2, mitochondrial [KO:K01869] [EC:6.1.1.4]
107112471  LARS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
107124152  IARS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
107122308  IARS2; isoleucyl-tRNA synthetase 2, mitochondrial [KO:K01870] [EC:6.1.1.5]
107124704  KARS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
107107078  RARS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
107121753  RARS2; arginyl-tRNA synthetase 2, mitochondrial [KO:K01887] [EC:6.1.1.19]
107123066  PARS2; prolyl-tRNA synthetase 2, mitochondrial (putative) [KO:K01881] [EC:6.1.1.15]
107107730  histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
107115774  histidine--tRNA ligase, cytoplasmic-like [KO:K01892] [EC:6.1.1.21]
107118665  FARS2; phenylalanyl-tRNA synthetase 2, mitochondrial [KO:K01889] [EC:6.1.1.20]
107112096  FARSA; phenylalanyl-tRNA synthetase alpha subunit [KO:K01889] [EC:6.1.1.20]
107115858  FARSB; phenylalanyl-tRNA synthetase beta subunit [KO:K01890] [EC:6.1.1.20]
107111836  YARS2; tyrosyl-tRNA synthetase 2 [KO:K01866] [EC:6.1.1.1]
107107746  YARS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
107111009  WARS2; tryptophanyl tRNA synthetase 2, mitochondrial [KO:K01867] [EC:6.1.1.2]
107121528  WARS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
gja00250  Alanine, aspartate and glutamate metabolism
gja00260  Glycine, serine and threonine metabolism
gja00270  Cysteine and methionine metabolism
gja00290  Valine, leucine and isoleucine biosynthesis
gja00330  Arginine and proline metabolism
gja00340  Histidine metabolism
gja00380  Tryptophan metabolism
gja00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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