KEGG   PATHWAY: hbc00630
Entry
hbc00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Hyphomonadaceae bacterium UKL13-1
Class
Metabolism; Carbohydrate metabolism
Pathway map
hbc00630  Glyoxylate and dicarboxylate metabolism
hbc00630

Module
hbc_M00621  Glycine cleavage system [PATH:hbc00630]
hbc_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hbc00630]
Other DBs
GO: 0046487 0043648
Organism
Hyphomonadaceae bacterium UKL13-1 [GN:hbc]
Gene
AEM38_06525  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AEM38_13310  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AEM38_05880  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AEM38_01695  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AEM38_06130  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_00220  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_02090  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_00155  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_14275  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_04075  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_08325  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AEM38_14805  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
AEM38_00655  dehydratase [KO:K17865] [EC:4.2.1.55]
AEM38_09265  crotonyl-CoA reductase [KO:K14446] [EC:1.3.1.85]
AEM38_05570  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AEM38_09250  protein meaA [KO:K14447] [EC:5.4.99.63]
AEM38_11365  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
AEM38_13390  dehydratase [KO:K14449] [EC:4.2.1.148]
AEM38_14745  aldolase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
AEM38_08415  acetyl-CoA carboxylase [KO:K01965] [EC:6.4.1.3]
AEM38_06200  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AEM38_04470  hypothetical protein [KO:K01847] [EC:5.4.99.2]
AEM38_04475  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
AEM38_03350  2-hydroxyacid dehydrogenase [KO:K00015] [EC:1.1.1.26]
AEM38_05245  hypothetical protein [KO:K01091] [EC:3.1.3.18]
AEM38_05760  hypothetical protein [KO:K01091] [EC:3.1.3.18]
AEM38_14285  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AEM38_14290  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AEM38_08335  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AEM38_07345  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AEM38_06290  glycine dehydrogenase [KO:K00282] [EC:1.4.4.2]
AEM38_06295  glycine dehydrogenase [KO:K00283] [EC:1.4.4.2]
AEM38_06275  hypothetical protein [KO:K00605] [EC:2.1.2.10]
AEM38_07975  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AEM38_12815  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AEM38_06280  glycine cleavage system protein H [KO:K02437]
AEM38_01210  hypothetical protein [KO:K11529] [EC:2.7.1.165]
AEM38_13165  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hbc00010  Glycolysis / Gluconeogenesis
hbc00020  Citrate cycle (TCA cycle)
hbc00030  Pentose phosphate pathway
hbc00053  Ascorbate and aldarate metabolism
hbc00071  Fatty acid degradation
hbc00230  Purine metabolism
hbc00250  Alanine, aspartate and glutamate metabolism
hbc00260  Glycine, serine and threonine metabolism
hbc00620  Pyruvate metabolism
hbc00710  Carbon fixation by Calvin cycle
hbc00750  Vitamin B6 metabolism
hbc00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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