KEGG   PATHWAY: jag00230
Entry
jag00230                    Pathway                                
Name
Purine metabolism - Janthinobacterium agaricidamnosum
Class
Metabolism; Nucleotide metabolism
Pathway map
jag00230  Purine metabolism
jag00230

Module
jag_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:jag00230]
jag_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:jag00230]
jag_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:jag00230]
jag_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:jag00230]
jag_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:jag00230]
jag_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:jag00230]
jag_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:jag00230]
Other DBs
GO: 0006163 0042278
Organism
Janthinobacterium agaricidamnosum [GN:jag]
Gene
GJA_3331  NUDIX domain protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
GJA_4415  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
GJA_1068  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
GJA_788  phosphoglucomutase/phosphomannomutase, C-terminal domain protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
GJA_4886  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
GJA_3603  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
GJA_982  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
GJA_1134  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
GJA_2533  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
GJA_2407  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
GJA_503  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
GJA_533  purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
GJA_532  purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
GJA_531  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
GJA_333  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
GJA_4591  purH; bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
GJA_4429  calcineurin-like phosphoesterase family protein [KO:K01081] [EC:3.1.3.5]
GJA_2150  5'-nucleotidase family protein [KO:K01081] [EC:3.1.3.5]
GJA_3475  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
GJA_4416  xapA; xanthosine phosphorylase [KO:K03783] [EC:2.4.2.1]
GJA_3912  UPF0345 protein ACIAD0356 [KO:K09913] [EC:2.4.2.1 2.4.2.2]
GJA_2134  yfiH; putative uncharacterized protein STY2850 [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
GJA_5226  phosphoribosyl transferase domain protein [KO:K00760] [EC:2.4.2.8]
GJA_2770  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
GJA_3464  nucleoside diphosphate kinase family protein [KO:K00940] [EC:2.7.4.6]
GJA_1272  rdgB; non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
GJA_4437  xdhA; xanthine dehydrogenase, small subunit [KO:K13481] [EC:1.17.1.4]
GJA_4436  xdhB; xanthine dehydrogenase, molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
GJA_4214  aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein [KO:K11177] [EC:1.17.1.4]
GJA_4213  FAD binding domain in molybdopterin dehydrogenase family protein [KO:K11178] [EC:1.17.1.4]
GJA_4212  yagT; putative xanthine dehydrogenase yagT iron-sulfur-binding subunit [KO:K13483]
GJA_2541  glutamine amidotransferase class-I family protein [KO:K01951] [EC:6.3.5.2]
GJA_2769  guaA; GMP synthase, N-terminal domain [KO:K01951] [EC:6.3.5.2]
GJA_4434  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
GJA_1269  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
GJA_733  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
GJA_734  ribonucleotide reductase, small chain family protein [KO:K00526] [EC:1.17.4.1]
GJA_4895  dgt; deoxyguanosinetriphosphate triphosphohydrolase, family protein [KO:K01129] [EC:3.1.5.1]
GJA_1860  putative uncharacterized domain protein [KO:K06952] [EC:3.1.3.89]
GJA_1267  relA/SpoT family protein [KO:K01139] [EC:2.7.6.5 3.1.7.2]
GJA_3222  ppx/GppA phosphatase family protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GJA_1962  relA/SpoT family protein [KO:K00951] [EC:2.7.6.5]
GJA_3588  adenylate and Guanylate cyclase catalytic domain protein [KO:K01768] [EC:4.6.1.1]
GJA_3506  CYTH domain protein [KO:K01768] [EC:4.6.1.1]
GJA_3449  purA; adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
GJA_743  pfkB carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
GJA_4433  adenosine/AMP deaminase family protein [KO:K01488] [EC:3.5.4.4]
GJA_3665  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
GJA_2165  putative uncharacterized protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
GJA_1193  add; adenosine deaminase [KO:K21053] [EC:3.5.4.2]
GJA_2168  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
GJA_4027  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
GJA_786  bis [KO:K01525] [EC:3.6.1.41]
GJA_2960  cysC; adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
GJA_3931  cysN; sulfate adenylyltransferase, large subunit [KO:K00956] [EC:2.7.7.4]
GJA_3930  cysD; sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
GJA_4439  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
GJA_4438  putative uncharacterized protein [KO:K16842] [EC:3.5.2.5]
GJA_2876  ureC; urease, alpha subunit [KO:K01428] [EC:3.5.1.5]
GJA_2877  ureB; urease subunit beta [KO:K01429] [EC:3.5.1.5]
GJA_2878  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
jag00030  Pentose phosphate pathway
jag00220  Arginine biosynthesis
jag00250  Alanine, aspartate and glutamate metabolism
jag00260  Glycine, serine and threonine metabolism
jag00340  Histidine metabolism
jag00630  Glyoxylate and dicarboxylate metabolism
jag00730  Thiamine metabolism
jag00740  Riboflavin metabolism
jag00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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