KEGG   PATHWAY: jcr00630
Entry
jcr00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Janibacter cremeus
Class
Metabolism; Carbohydrate metabolism
Pathway map
jcr00630  Glyoxylate and dicarboxylate metabolism
jcr00630

Module
jcr_M00621  Glycine cleavage system [PATH:jcr00630]
jcr_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:jcr00630]
Other DBs
GO: 0046487 0043648
Organism
Janibacter cremeus [GN:jcr]
Gene
O9K63_03020  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
O9K63_06690  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
O9K63_09370  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
O9K63_08015  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
O9K63_14500  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
O9K63_04035  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
O9K63_11705  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
O9K63_04245  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
O9K63_00800  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
O9K63_12775  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
O9K63_12995  thiolase family protein [KO:K00626] [EC:2.3.1.9]
O9K63_15285  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
O9K63_00795  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
O9K63_00740  protein meaA [KO:K14447] [EC:5.4.99.63]
O9K63_16225  MaoC family dehydratase [KO:K14449] [EC:4.2.1.148]
O9K63_16190  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
O9K63_07875  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
O9K63_07790  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
O9K63_07795  acyl-CoA carboxylase subunit epsilon [KO:K27095]
O9K63_06045  acyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
O9K63_15600  methylmalonyl-CoA mutase family protein [KO:K01847] [EC:5.4.99.2]
O9K63_15605  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
O9K63_08825  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
O9K63_13860  catalase [KO:K03781] [EC:1.11.1.6]
O9K63_05800  catalase [KO:K03781] [EC:1.11.1.6]
O9K63_03510  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
O9K63_05865  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
O9K63_00660  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O9K63_04550  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
O9K63_03615  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
O9K63_03605  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
O9K63_06780  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
O9K63_04525  gcvH; glycine cleavage system protein GcvH [KO:K02437]
O9K63_03665  glycerate kinase [KO:K00865] [EC:2.7.1.165]
O9K63_02900  glycerate kinase [KO:K00865] [EC:2.7.1.165]
O9K63_00555  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
O9K63_11190  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
O9K63_11195  4Fe-4S dicluster domain-containing protein [KO:K00124]
O9K63_01545  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
jcr00010  Glycolysis / Gluconeogenesis
jcr00020  Citrate cycle (TCA cycle)
jcr00030  Pentose phosphate pathway
jcr00071  Fatty acid degradation
jcr00230  Purine metabolism
jcr00250  Alanine, aspartate and glutamate metabolism
jcr00260  Glycine, serine and threonine metabolism
jcr00620  Pyruvate metabolism
jcr00710  Carbon fixation by Calvin cycle
jcr00750  Vitamin B6 metabolism
jcr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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