KEGG   PATHWAY: jme00630
Entry
jme00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Janibacter melonis
Class
Metabolism; Carbohydrate metabolism
Pathway map
jme00630  Glyoxylate and dicarboxylate metabolism
jme00630

Module
jme_M00621  Glycine cleavage system [PATH:jme00630]
jme_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:jme00630]
Other DBs
GO: 0046487 0043648
Organism
Janibacter melonis [GN:jme]
Gene
EEW87_002305  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
EEW87_003540  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
EEW87_011395  citrate synthase [KO:K01647] [EC:2.3.3.1]
EEW87_008295  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
EEW87_000940  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
EEW87_003125  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
EEW87_007950  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
EEW87_010475  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
EEW87_012100  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
EEW87_016130  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
EEW87_016135  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
EEW87_010480  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
EEW87_010525  protein meaA [KO:K14447] [EC:5.4.99.63]
EEW87_011215  hypothetical protein [KO:K14449] [EC:4.2.1.148]
EEW87_011295  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
EEW87_003765  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
EEW87_003695  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
EEW87_003815  methylmalonyl-CoA carboxyltransferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
EEW87_003810  acyl-CoA carboxylase subunit epsilon [KO:K27095]
EEW87_005930  acyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
EEW87_011745  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
EEW87_011750  methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
EEW87_005090  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
EEW87_006170  catalase [KO:K03781] [EC:1.11.1.6]
EEW87_013350  catalase [KO:K03781] [EC:1.11.1.6]
EEW87_006100  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
EEW87_008785  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
EEW87_010610  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K00600] [EC:2.1.2.1]
EEW87_007635  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
EEW87_008705  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
EEW87_005245  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EEW87_008715  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EEW87_007660  gcvH; glycine cleavage system protein GcvH [KO:K02437]
EEW87_014890  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
EEW87_004760  glycerate kinase [KO:K00865] [EC:2.7.1.165]
EEW87_008665  glycerate kinase [KO:K00865] [EC:2.7.1.165]
EEW87_010730  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
EEW87_014335  dehydrogenase [KO:K00123] [EC:1.17.1.9]
EEW87_014340  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
EEW87_014345  4Fe-4S dicluster domain-containing protein [KO:K00124]
EEW87_011195  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
jme00010  Glycolysis / Gluconeogenesis
jme00020  Citrate cycle (TCA cycle)
jme00030  Pentose phosphate pathway
jme00053  Ascorbate and aldarate metabolism
jme00071  Fatty acid degradation
jme00230  Purine metabolism
jme00250  Alanine, aspartate and glutamate metabolism
jme00260  Glycine, serine and threonine metabolism
jme00620  Pyruvate metabolism
jme00710  Carbon fixation by Calvin cycle
jme00750  Vitamin B6 metabolism
jme00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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