KEGG   PATHWAY: jre00240
Entry
jre00240                    Pathway                                
Name
Pyrimidine metabolism - Juglans regia (English walnut)
Class
Metabolism; Nucleotide metabolism
Pathway map
jre00240  Pyrimidine metabolism
jre00240

Module
jre_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:jre00240]
jre_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:jre00240]
jre_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:jre00240]
jre_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:jre00240]
Other DBs
GO: 0006220 0006213
Organism
Juglans regia (English walnut) [GN:jre]
Gene
108989639  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
108996366  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
108984511  aspartate carbamoyltransferase 2, chloroplastic [KO:K00609] [EC:2.1.3.2]
108980700  dihydroorotase, mitochondrial isoform X1 [KO:K01465] [EC:3.5.2.3]
108988520  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1 [KO:K00254] [EC:1.3.5.2]
108988995  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
108990755  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
108987390  UMP-CMP kinase isoform X1 [KO:K13800] [EC:2.7.4.14]
108989674  UMP-CMP kinase 3-like isoform X1 [KO:K13800] [EC:2.7.4.14]
109008033  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
108990484  uridylate kinase [KO:K09903] [EC:2.7.4.22]
108986589  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
108987139  nucleoside diphosphate kinase IV, chloroplastic/mitochondrial-like [KO:K00940] [EC:2.7.4.6]
108990044  nucleoside diphosphate kinase B [KO:K00940] [EC:2.7.4.6]
108993788  nucleoside diphosphate kinase III, chloroplastic/mitochondrial-like [KO:K00940] [EC:2.7.4.6]
108988782  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
109014015  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
109010565  apyrase 1-like [KO:K14641] [EC:3.6.1.5]
109009725  ectonucleotide pyrophosphatase/phosphodiesterase family member 3 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
109002545  nudix hydrolase 25 [KO:K26955] [EC:3.6.1.17]
108994151  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
108988816  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
108998301  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
109009054  CTP synthase-like isoform X1 [KO:K01937] [EC:6.3.4.2]
109021467  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
109019908  CTP synthase-like isoform X1 [KO:K01937] [EC:6.3.4.2]
108979064  inorganic pyrophosphatase TTM1-like [KO:K00876] [EC:2.7.1.48]
108986688  inorganic pyrophosphatase TTM1-like isoform X1 [KO:K00876] [EC:2.7.1.48]
108994348  uridine kinase-like protein 3 isoform X1 [KO:K00876] [EC:2.7.1.48]
108992088  uridine kinase-like protein 1, chloroplastic isoform X1 [KO:K00876] [EC:2.7.1.48]
108985711  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
108982808  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
109003806  inorganic pyrophosphatase TTM2-like isoform X1 [KO:K00876] [EC:2.7.1.48]
108981648  inorganic pyrophosphatase TTM2-like [KO:K00876] [EC:2.7.1.48]
108994838  uridine kinase-like protein 3 isoform X1 [KO:K00876] [EC:2.7.1.48]
108993608  uridine kinase-like protein 1, chloroplastic isoform X1 [KO:K00876] [EC:2.7.1.48]
108991725  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
109009475  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
109011733  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
109018719  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
109009305  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
108981116  uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
109005035  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
108990697  uracil phosphoribosyltransferase-like [KO:K00761] [EC:2.4.2.9]
109020472  uracil phosphoribosyltransferase isoform X1 [KO:K00761] [EC:2.4.2.9]
108994665  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
109019929  7-methylguanosine phosphate-specific 5'-nucleotidase A-like [KO:K24242] [EC:3.1.3.91]
109009754  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
108980341  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
109011399  ribonucleoside-diphosphate reductase large subunit-like isoform X1 [KO:K10807] [EC:1.17.4.1]
109009987  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
108987034  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
109005903  ribonucleoside-diphosphate reductase small chain A isoform X1 [KO:K10808] [EC:1.17.4.1]
109021887  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
108987684  dCTP pyrophosphatase 1-like isoform X4 [KO:K16904] [EC:3.6.1.12]
109019411  dCTP pyrophosphatase 1-like isoform X1 [KO:K16904] [EC:3.6.1.12]
109011531  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
109011532  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
109011533  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
109010564  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
109017696  dCTP pyrophosphatase 1-like isoform X1 [KO:K16904] [EC:3.6.1.12]
109020279  dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
108996200  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
108991197  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
109000716  5'-deoxynucleotidase HDDC2 isoform X2 [KO:K07023] [EC:3.1.3.89]
109003814  5'-deoxynucleotidase hdd1 [KO:K07023] [EC:3.1.3.89]
108995380  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
109000982  thymidylate kinase-like isoform X2 [KO:K00943] [EC:2.7.4.9]
108987656  thymidylate kinase isoform X1 [KO:K00943] [EC:2.7.4.9]
108995523  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
109012629  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
108996815  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
108986993  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
108991352  putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X2 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
108983433  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
108983065  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [KO:K00207] [EC:1.3.1.2]
108993229  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [KO:K00207] [EC:1.3.1.2]
109007334  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
109000588  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
108995725  beta-ureidopropionase-like [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
jre00030  Pentose phosphate pathway
jre00220  Arginine biosynthesis
jre00250  Alanine, aspartate and glutamate metabolism
jre00280  Valine, leucine and isoleucine degradation
jre00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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