KEGG   PATHWAY: kpr00240
Entry
kpr00240                    Pathway                                
Name
Pyrimidine metabolism - Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
Class
Metabolism; Nucleotide metabolism
Pathway map
kpr00240  Pyrimidine metabolism
kpr00240

Module
kpr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:kpr00240]
kpr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:kpr00240]
kpr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:kpr00240]
kpr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:kpr00240]
kpr_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:kpr00240]
Other DBs
GO: 0006220 0006213
Organism
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 [GN:kpr]
Gene
KPR_0964  carB; highly similar to carbamoyl-phosphate synthase large chain from Salmonella typhimurium (sp [KO:K01955] [EC:6.3.5.5]
KPR_0963  carA; highly similar to carbamoyl-phosphate synthase small chain from Escherichia coli strain SMS-3-5 - SECEC (tr [KO:K01956] [EC:6.3.5.5]
KPR_0634  pyrB; highly similar to aspartate carbamoyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00609] [EC:2.1.3.2]
KPR_0633  pyrI; highly similar to aspartate carbamoyltransferase regulatory chain from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00610]
KPR_3407  unnamed protein product; highly similar to putative dihydroorotase from Escherichia coli (tr [KO:K01465] [EC:3.5.2.3]
KPR_2120  pyrC; highly similar to dihydroorotase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K01465] [EC:3.5.2.3]
KPR_0613  unnamed protein product; highly similar to putative amidohydrolase from Enterobacter sp. strain 638 (tr [KO:K01465] [EC:3.5.2.3]
KPR_1658  pyrD; highly similar to dihydroorotate dehydrogenase from Klebsiella pneumoniae strain 342 (sp [KO:K00254] [EC:1.3.5.2]
KPR_4930  pyrE; highly similar to orotate phosphoribosyltransferase from Klebsiella pneumoniae strain 342 (sp [KO:K00762] [EC:2.4.2.10]
KPR_2329  pyrF; highly similar to orotidine 5'-phosphate decarboxylase from Klebsiella pneumoniae strain 342 (sp [KO:K01591] [EC:4.1.1.23]
KPR_1115  pyrH; highly similar to uridylate kinase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K09903] [EC:2.7.4.22]
KPR_1428  ndk; highly similar to nucleoside diphosphate kinase from Klebsiella pneumoniae strain 342 (sp [KO:K00940] [EC:2.7.4.6]
KPR_4134  mazG; highly similar to MazG family protein from Escherichia coli strain SMS-3-5 - SECEC (tr [KO:K04765] [EC:3.6.1.9]
KPR_4842  yhdE; highly similar to Maf-like protein YhdE from Salmonella typhimurium (sp [KO:K06287] [EC:3.6.1.-]
KPR_4718  ygjP; highly similar to putative uncharacterized protein YgjP from Escherichia coli strain UTI89 - UPEC (tr [KO:K07043] [EC:3.6.1.-]
KPR_4133  pyrG; highly similar to CTP synthase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K01937] [EC:6.3.4.2]
KPR_3641  cmk; highly similar to cytidylate kinase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00945] [EC:2.7.4.25]
KPR_2256  unnamed protein product; highly similar to pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase from Escherichia coli 83972 (tr [KO:K08320] [EC:3.6.1.65]
KPR_1578  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
KPR_4217  ushA; highly similar to silent protein ushA(0) from Salmonella typhimurium (sp [KO:K11751] [EC:3.1.3.5 3.6.1.45]
KPR_4103  surE; highly similar to multifunctional protein SurE from Klebsiella pneumoniae strain 342 (sp [KO:K03787] [EC:3.1.3.5 3.1.3.6]
KPR_3883  nagD; highly similar to N-acetylglucosamine metabolism from Escherichia coli strain UTI89 - UPEC (tr [KO:K02566] [EC:3.1.3.5]
KPR_0908  yjjG; highly similar to putative uncharacterized protein YjjG from Escherichia coli O6 (tr [KO:K08723] [EC:3.1.3.-]
KPR_0277  udp; highly similar to uridine phosphorylase from Klebsiella aerogenes (sp [KO:K00757] [EC:2.4.2.3]
KPR_4389  unnamed protein product; highly similar to UPF0345 protein KPK_4351 from Klebsiella pneumoniae strain 342 (sp [KO:K09913] [EC:2.4.2.1 2.4.2.2]
KPR_1883  upp; highly similar to uracil phosphoribosyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00761] [EC:2.4.2.9]
KPR_0583  cpdB; highly similar to putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase from Salmonella enterica (tr [KO:K01119] [EC:3.1.4.16 3.1.3.6]
KPR_2943  rihA; highly similar to pyrimidine-specific ribonucleoside hydrolase RihA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K01250] [EC:3.2.2.-]
KPR_0958  rihC; highly similar to non-specific ribonucleoside hydrolase RihC from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K12700] [EC:3.2.2.-]
KPR_4147  ygdH; highly similar to putative uncharacterized protein YgdH from Escherichia coli strain UTI89 - UPEC (tr [KO:K06966] [EC:3.2.2.10 3.2.2.-]
KPR_1509  cdd; highly similar to cytidine deaminase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K01489] [EC:3.5.4.5]
KPR_0719  unnamed protein product; highly similar to N-isopropylammelide isopropylaminohydrolase from Escherichia coli strain ATCC 8739 - DSM 1576 - Crooks (tr [KO:K01485] [EC:3.5.4.1 3.5.4.21]
KPR_3077  unnamed protein product; similar to putative cytosine deaminase from Serratia odorifera (tr [KO:K01485] [EC:3.5.4.1 3.5.4.21]
KPR_3946  codA; highly similar to cytosine deaminase from Cronobacter turicensis (tr [KO:K01485] [EC:3.5.4.1 3.5.4.21]
KPR_0622  nrdD; highly similar to putative anaerobic ribonucleoside triphosphate reductase; [Salmonella paratyphi C (tr [KO:K21636] [EC:1.1.98.6]
KPR_1579  dcd; Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
KPR_2071  nrdA; highly similar to ribonucleoside-diphosphate reductase 1 subunit alpha from Salmonella typhimurium (sp [KO:K00525] [EC:1.17.4.1]
KPR_1283  nrdE; highly similar to ribonucleoside-diphosphate reductase from Escherichia coli O150:H5 strain SE15 (tr [KO:K00525] [EC:1.17.4.1]
KPR_2070  nrdB; highly similar to ribonucleotide-diphosphate reductase beta subunit from Escherichia coli O1:K1 - APEC (tr [KO:K00526] [EC:1.17.4.1]
KPR_1282  nrdF; highly similar to ribonucleoside-diphosphate reductase 2 subunit beta from Salmonella typhimurium (sp [KO:K00526] [EC:1.17.4.1]
KPR_2024  unnamed protein product; highly similar to UPF0207 protein KPN78578_26370 from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K08722] [EC:3.1.3.89]
KPR_2136  tmk; highly similar to thymidylate kinase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00943] [EC:2.7.4.9]
KPR_4933  dut; highly similar to deoxyuridine 5'-triphosphate nucleotidohydrolase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K01520] [EC:3.6.1.23]
KPR_0916  deoA; highly similar to thymidine phosphorylase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00758] [EC:2.4.2.4]
KPR_3119  tdk; highly similar to thymidine kinase from Escherichia coli strain UTI89 - UPEC (tr [KO:K00857] [EC:2.7.1.21]
KPR_1797  thyA; highly similar to thymidylate synthase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K00560] [EC:2.1.1.45]
KPR_3617  unnamed protein product; similar to putative amidase, hydantoinase-carbamoylase family from Polaromonas naphthalenivorans (tr [KO:K06016] [EC:3.5.1.6 3.5.1.87]
KPR_3485  rutA; highly similar to putative monooxygenase RutA from Escherichia coli strain K12 (sp [KO:K09018] [EC:1.14.99.46]
KPR_3490  rutF; highly similar to predicted oxidoreductase, flavin:NADH component from Escherichia coli O1:K1 - APEC (tr [KO:K09024] [EC:1.5.1.-]
KPR_3486  unnamed protein product; highly similar to peroxyureidoacrylate-ureidoacrylate amidohydrolase RutB from Klebsiella variicola (sp [KO:K09020] [EC:3.5.1.110]
KPR_3487  rutC; highly similar to pyrimidine utilization protein C from Escherichia coli O44:H18 strain 042 - EAEC (tr [KO:K09021]
KPR_3488  rutD; similar to pyrimidine utilization protein RutD from Escherichia coli strain K12 (sp [KO:K09023] [EC:3.5.1.-]
KPR_2473  ydfG; highly similar to NADP-dependent L-serine-L-allo-threonine dehydrogenase YdfG from Escherichia coli O6 (sp [KO:K16066] [EC:1.1.1.381 1.1.1.-]
KPR_3489  rutE; highly similar to putative NADH dehydrogenase-NAD(P)H nitroreductase KPN78578_10080 from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
kpr00030  Pentose phosphate pathway
kpr00220  Arginine biosynthesis
kpr00250  Alanine, aspartate and glutamate metabolism
kpr00280  Valine, leucine and isoleucine degradation
kpr00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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