KEGG   PATHWAY: lalg00630
Entry
lalg00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Lentibacter algarum
Class
Metabolism; Carbohydrate metabolism
Pathway map
lalg00630  Glyoxylate and dicarboxylate metabolism
lalg00630

Module
lalg_M00373  Ethylmalonyl pathway [PATH:lalg00630]
lalg_M00621  Glycine cleavage system [PATH:lalg00630]
lalg_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:lalg00630]
Other DBs
GO: 0046487 0043648
Organism
Lentibacter algarum [GN:lalg]
Gene
LentiSH36_00965  Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [KO:K01895] [EC:6.2.1.1]
LentiSH36_01027  acs; acetyl-coenzyme A synthetase Acs [KO:K01895] [EC:6.2.1.1]
LentiSH36_01661  glcB; malate synthase GlcB [KO:K01638] [EC:2.3.3.9]
LentiSH36_00606  mdh; malate dehydrogenase Mdh [KO:K00024] [EC:1.1.1.37]
LentiSH36_01152  gltA1; citrate synthase GltA [KO:K01647] [EC:2.3.3.1]
LentiSH36_00017  gltA2; citrate synthase GltA [KO:K01647] [EC:2.3.3.1]
LentiSH36_01267  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
LentiSH36_01266  acnB; Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
LentiSH36_01914  phaA; acetyl-CoA acetyltransferase PhaA [KO:K00626] [EC:2.3.1.9]
LentiSH36_02056  fadA1; 3-ketoacyl-CoA thiolase FadA [KO:K00626] [EC:2.3.1.9]
LentiSH36_02929  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LentiSH36_00091  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LentiSH36_00206  fadA2; 3-ketoacyl-CoA thiolase FadA [KO:K00626] [EC:2.3.1.9]
LentiSH36_01915  phaB; acetoacetyl-CoA reductase PhaB [KO:K00023] [EC:1.1.1.36]
LentiSH36_01908  maoC like domain-containing protein [KO:K17865] [EC:4.2.1.55]
LentiSH36_00624  crotonyl-CoA reductase [KO:K14446] [EC:1.3.1.85]
LentiSH36_00080  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
LentiSH36_00622  mutB; methylmalonyl-CoA mutase large subunit [KO:K14447] [EC:5.4.99.63]
LentiSH36_01963  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
LentiSH36_00612  L-erythro-3-methylmalyl-CoA dehydratase [KO:K14449] [EC:4.2.1.148]
LentiSH36_02533  putative citrate lyase subunit beta [KO:K08691] [EC:4.1.3.24 4.1.3.25]
LentiSH36_00609  putative citrate lyase subunit beta [KO:K14451] [EC:3.1.2.30]
LentiSH36_01722  pccA; propionyl-CoA carboxylase alpha chain [KO:K01965] [EC:6.4.1.3]
LentiSH36_01727  pccB; propionyl-CoA carboxylase beta chain [KO:K01966] [EC:6.4.1.3 2.1.3.15]
LentiSH36_01718  bhbA; methylmalonyl-CoA mutase BhbA [KO:K01847] [EC:5.4.99.2]
LentiSH36_02484  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
LentiSH36_02483  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
LentiSH36_02481  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
LentiSH36_00141  gyaR2; glyoxylate reductase GyaR [KO:K00015] [EC:1.1.1.26]
LentiSH36_01872  putative glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LentiSH36_00962  phosphoglycolate phosphatase-like protein [KO:K01091] [EC:3.1.3.18]
LentiSH36_00328  hydrolase, HAD-superfamily [KO:K01091] [EC:3.1.3.18]
LentiSH36_00382  putative hydrolase [KO:K01091] [EC:3.1.3.18]
LentiSH36_02158  putative serine-glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
LentiSH36_00898  puuA2_1; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
LentiSH36_01523  glnA; glutamine synthetase GlnA [KO:K01915] [EC:6.3.1.2]
LentiSH36_01609  puuA2_2; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
LentiSH36_01611  puuA1; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
LentiSH36_01613  putative serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LentiSH36_02210  glyA; serine hydroxymethyltransferase GlyA [KO:K00600] [EC:2.1.2.1]
LentiSH36_01853  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LentiSH36_01855  gcvT; aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LentiSH36_01413  lpdA2; dihydrolipoyl dehydrogenase LpdA [KO:K00382] [EC:1.8.1.4]
LentiSH36_00600  lpd2; dihydrolipoyl dehydrogenase 2 [KO:K00382] [EC:1.8.1.4]
LentiSH36_01854  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LentiSH36_00029  putative hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
LentiSH36_02329  fdhF; formate dehydrogenase H [KO:K00123] [EC:1.17.1.9]
LentiSH36_00668  nuoEF; NADH-quinone oxidoreductase subunits E/F (fused) [KO:K22515] [EC:1.17.1.9]
LentiSH36_01168  purN_2; phosphoribosylglycinamide formyltransferase PurN [KO:K01433] [EC:3.5.1.10]
LentiSH36_01988  hutG; N-formylglutamate deformylase HutG [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
lalg00010  Glycolysis / Gluconeogenesis
lalg00020  Citrate cycle (TCA cycle)
lalg00030  Pentose phosphate pathway
lalg00053  Ascorbate and aldarate metabolism
lalg00071  Fatty acid degradation
lalg00230  Purine metabolism
lalg00250  Alanine, aspartate and glutamate metabolism
lalg00260  Glycine, serine and threonine metabolism
lalg00620  Pyruvate metabolism
lalg00710  Carbon fixation by Calvin cycle
lalg00750  Vitamin B6 metabolism
lalg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system