KEGG   PATHWAY: lob00970
Entry
lob00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Candidatus Lokiarchaeum ossiferum
Class
Genetic Information Processing; Translation
Pathway map
lob00970  Aminoacyl-tRNA biosynthesis
lob00970

Organism
Candidatus Lokiarchaeum ossiferum [GN:lob]
Gene
NEF87_001985  Glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
NEF87_002209  Glutamyl-tRNA(Gln) amidotransferase subunit D [KO:K09482] [EC:6.3.5.7]
NEF87_002237  Glutamyl-tRNA(Gln) amidotransferase subunit D [KO:K09482] [EC:6.3.5.7]
NEF87_002210  Glutamyl-tRNA(Gln) amidotransferase subunit E [KO:K03330] [EC:6.3.5.7]
NEF87_002236  Glutamyl-tRNA(Gln) amidotransferase subunit E [KO:K03330] [EC:6.3.5.7]
NEF87_002176  Alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
NEF87_003960  Alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
NEF87_004549  Aspartate--tRNA(Asp/Asn) ligase [KO:K09759] [EC:6.1.1.23]
NEF87_001591  Aspartate--tRNA(Asp/Asn) ligase [KO:K01893] [EC:6.1.1.22]
NEF87_004514  Asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
NEF87_004429  hypothetical protein [KO:K01880] [EC:6.1.1.14]
NEF87_001418  Threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
NEF87_002830  Serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
NEF87_005019  hypothetical protein [KO:K10837] [EC:2.7.1.164]
NEF87_001814  O-phosphoseryl-tRNA(Sec) selenium transferase [KO:K03341] [EC:2.9.1.2]
NEF87_003225  Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
NEF87_003500  Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
NEF87_003759  hypothetical protein [KO:K01884] [EC:6.1.1.16]
NEF87_000068  Methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
NEF87_001829  Isoleucine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
NEF87_000107  Isoleucine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
NEF87_001120  Leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
NEF87_001823  Isoleucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
NEF87_004628  Isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
NEF87_002721  Lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
NEF87_003719  Arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
NEF87_003713  Proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
NEF87_001295  Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
NEF87_002480  Phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
NEF87_002479  Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
NEF87_001509  Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
NEF87_004937  Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
NEF87_003012  Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
lob00250  Alanine, aspartate and glutamate metabolism
lob00260  Glycine, serine and threonine metabolism
lob00270  Cysteine and methionine metabolism
lob00290  Valine, leucine and isoleucine biosynthesis
lob00300  Lysine biosynthesis
lob00330  Arginine and proline metabolism
lob00340  Histidine metabolism
lob00380  Tryptophan metabolism
lob00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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