KEGG   PATHWAY: lrs00010
Entry
lrs00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Limnoglobus roseus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
lrs00010  Glycolysis / Gluconeogenesis
lrs00010

Module
lrs_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lrs00010]
lrs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lrs00010]
Other DBs
GO: 0006096 0006094
Organism
Limnoglobus roseus [GN:lrs]
Gene
PX52LOC_06461  ROK family protein [KO:K25026] [EC:2.7.1.2]
PX52LOC_06816  sugar kinase [KO:K25026] [EC:2.7.1.2]
PX52LOC_06463  ROK family protein [KO:K25026] [EC:2.7.1.2]
PX52LOC_08201  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PX52LOC_00820  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PX52LOC_07470  diphosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00850] [EC:2.7.1.11]
PX52LOC_00875  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
PX52LOC_04232  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
PX52LOC_01074  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PX52LOC_01073  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PX52LOC_08202  phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
PX52LOC_01457  cofactor-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
PX52LOC_07155  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
PX52LOC_07406  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PX52LOC_04273  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
PX52LOC_06164  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
PX52LOC_06165  pyruvate dehydrogenase [KO:K00627] [EC:2.3.1.12]
PX52LOC_05462  lpdA_1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PX52LOC_06032  lpdA_2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PX52LOC_02380  hypothetical protein [KO:K00172] [EC:1.2.7.1]
PX52LOC_04284  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PX52LOC_04285  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PX52LOC_01574  alcohol dehydrogenase, zinc-containing [KO:K00001] [EC:1.1.1.1]
PX52LOC_02726  NAD(P)-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
PX52LOC_03451  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
PX52LOC_05168  pyrrolo-quinoline quinone [KO:K00114] [EC:1.1.2.8]
PX52LOC_01340  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
PX52LOC_01488  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PX52LOC_04899  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
PX52LOC_05089  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
PX52LOC_04218  HAD family phosphatase [KO:K20866] [EC:3.1.3.10]
PX52LOC_04148  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
PX52LOC_07460  ROK family protein [KO:K00886] [EC:2.7.1.63]
PX52LOC_00213  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
lrs00020  Citrate cycle (TCA cycle)
lrs00030  Pentose phosphate pathway
lrs00500  Starch and sucrose metabolism
lrs00620  Pyruvate metabolism
lrs00640  Propanoate metabolism
lrs00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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