KEGG   PATHWAY: mlir00010
Entry
mlir00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Massilia litorea
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mlir00010  Glycolysis / Gluconeogenesis
mlir00010

Module
mlir_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mlir00010]
mlir_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mlir00010]
mlir_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mlir00010]
mlir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mlir00010]
Other DBs
GO: 0006096 0006094
Organism
Massilia litorea [GN:mlir]
Gene
LPB04_10125  glucokinase [KO:K00845] [EC:2.7.1.2]
LPB04_10165  glucokinase [KO:K00845] [EC:2.7.1.2]
LPB04_00310  glucokinase [KO:K00845] [EC:2.7.1.2]
LPB04_11420  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LPB04_18375  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
LPB04_08035  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
LPB04_09865  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
LPB04_08170  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
LPB04_13260  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
LPB04_00395  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
LPB04_08160  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
LPB04_06985  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
LPB04_02050  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
LPB04_11885  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
LPB04_08165  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LPB04_14575  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LPB04_15930  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
LPB04_10315  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
LPB04_10320  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
LPB04_05110  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LPB04_10325  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LPB04_17295  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LPB04_12650  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LPB04_04585  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LPB04_01960  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LPB04_14380  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
LPB04_00815  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
LPB04_23690  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
LPB04_04505  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
LPB04_14890  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
LPB04_23205  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LPB04_16895  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
LPB04_23075  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
LPB04_10105  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
LPB04_09150  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
LPB04_09320  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
LPB04_04990  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mlir00020  Citrate cycle (TCA cycle)
mlir00030  Pentose phosphate pathway
mlir00500  Starch and sucrose metabolism
mlir00620  Pyruvate metabolism
mlir00640  Propanoate metabolism
mlir00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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