KEGG   PATHWAY: msin00240
Entry
msin00240                   Pathway                                
Name
Pyrimidine metabolism - Magnolia sinica
Class
Metabolism; Nucleotide metabolism
Pathway map
msin00240  Pyrimidine metabolism
msin00240

Module
msin_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:msin00240]
msin_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msin00240]
msin_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msin00240]
msin_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msin00240]
Other DBs
GO: 0006220 0006213
Organism
Magnolia sinica [GN:msin]
Gene
131226252  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
131240685  carbamoyl-phosphate synthase small chain, chloroplastic isoform X1 [KO:K01956] [EC:6.3.5.5]
131245260  aspartate carbamoyltransferase 1, chloroplastic [KO:K00609] [EC:2.1.3.2]
131240902  dihydroorotase, mitochondrial isoform X1 [KO:K01465] [EC:3.5.2.3]
131236820  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1 [KO:K00254] [EC:1.3.5.2]
131226653  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
131248135  UMP-CMP kinase 4-like [KO:K13800] [EC:2.7.4.14]
131233139  UMP-CMP kinase 4-like [KO:K13800] [EC:2.7.4.14]
131218122  UMP-CMP kinase 4-like [KO:K13800] [EC:2.7.4.14]
131218123  UMP-CMP kinase 4-like [KO:K13800] [EC:2.7.4.14]
131235707  uridylate kinase PUMPKIN, chloroplastic isoform X1 [KO:K09903] [EC:2.7.4.22]
131248053  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
131255648  nucleoside diphosphate kinase 2, chloroplastic isoform X1 [KO:K00940] [EC:2.7.4.6]
131241217  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
131251102  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
131231399  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
131227072  apyrase 2-like isoform X1 [KO:K14641] [EC:3.6.1.5]
131240619  probable apyrase 1 isoform X1 [KO:K14641] [EC:3.6.1.5]
131218642  uncharacterized protein LOC131218642 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
131251480  nudix hydrolase 25 [KO:K26955] [EC:3.6.1.17]
131224787  uncharacterized protein LOC131224787 isoform X1 [KO:K01937] [EC:6.3.4.2]
131240869  uncharacterized protein LOC131240869 isoform X1 [KO:K01937] [EC:6.3.4.2]
131245549  uncharacterized protein LOC131245549 isoform X1 [KO:K01937] [EC:6.3.4.2]
131239529  uridine/cytidine kinase UKL1, chloroplastic isoform X1 [KO:K00876] [EC:2.7.1.48]
131255626  inorganic pyrophosphatase TTM2-like isoform X1 [KO:K00876] [EC:2.7.1.48]
131255928  uridine kinase-like protein 4 isoform X1 [KO:K00876] [EC:2.7.1.48]
131257995  inorganic pyrophosphatase TTM2-like isoform X1 [KO:K00876] [EC:2.7.1.48]
131246115  uridine kinase-like protein 3 isoform X1 [KO:K00876] [EC:2.7.1.48]
131222617  uncharacterized protein LOC131222617 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
131222778  uncharacterized protein LOC131222778 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
131218193  uncharacterized protein LOC131218193 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
131220022  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
131251131  probable uridine nucleosidase 1 isoform X1 [KO:K01240] [EC:3.2.2.3]
131231462  uridine nucleosidase 1-like isoform X1 [KO:K01240] [EC:3.2.2.3]
131252773  uracil phosphoribosyltransferase isoform X1 [KO:K00761] [EC:2.4.2.9]
131258196  pseudouridine-5'-phosphate glycosidase isoform X1 [KO:K16329] [EC:4.2.1.70]
131232543  uncharacterized protein LOC131232543 isoform X1 [KO:K24242] [EC:3.1.3.91]
131236137  ribonucleoside-diphosphate reductase large subunit-like isoform X1 [KO:K10807] [EC:1.17.4.1]
131225021  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
131242469  ribonucleoside-diphosphate reductase large subunit isoform X1 [KO:K10807] [EC:1.17.4.1]
131239492  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
131226126  ribonucleoside-diphosphate reductase small chain A isoform X1 [KO:K10808] [EC:1.17.4.1]
131246786  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
131239699  uncharacterized protein LOC131239699 [KO:K16904] [EC:3.6.1.12]
131240426  uncharacterized protein LOC131240426 [KO:K16904] [EC:3.6.1.12]
131245852  uncharacterized protein LOC131245852 [KO:K16904] [EC:3.6.1.12]
131218385  uncharacterized protein LOC131218385 [KO:K16904] [EC:3.6.1.12]
131217092  uncharacterized protein LOC131217092 isoform X1 [KO:K07023] [EC:3.1.3.89]
131234685  uncharacterized protein LOC131234685 [KO:K07023] [EC:3.1.3.89]
131239493  uncharacterized protein LOC131239493 isoform X1 [KO:K01493] [EC:3.5.4.12]
131246274  thymidylate kinase isoform X1 [KO:K00943] [EC:2.7.4.9]
131228715  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
131218224  deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 [KO:K01520] [EC:3.6.1.23]
131219533  thymidine kinase a [KO:K00857] [EC:2.7.1.21]
131237929  putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
131234405  bifunctional dihydrofolate reductase-thymidylate synthase-like isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
131227128  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
131251025  dihydropyrimidinase-like isoform X1 [KO:K01464] [EC:3.5.2.2]
131251026  dihydropyrimidinase-like isoform X1 [KO:K01464] [EC:3.5.2.2]
131229758  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
msin00030  Pentose phosphate pathway
msin00220  Arginine biosynthesis
msin00250  Alanine, aspartate and glutamate metabolism
msin00280  Valine, leucine and isoleucine degradation
msin00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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