KEGG   PATHWAY: msj00010
Entry
msj00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Methanosarcina siciliae C2J
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
msj00010  Glycolysis / Gluconeogenesis
msj00010

Module
msj_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msj00010]
msj_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msj00010]
msj_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msj00010]
Other DBs
GO: 0006096 0006094
Organism
Methanosarcina siciliae C2J [GN:msj]
Gene
MSSAC_0759  Glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
MSSAC_3156  ADP-dependent glucokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
MSSAC_3157  ADP-dependent phosphofructokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
MSSAC_1242  Fructose-1,6-bisphosphatase, GlpX type [KO:K02446] [EC:3.1.3.11]
MSSAC_3626  Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase [KO:K16305] [EC:4.1.2.13 2.2.1.11]
MSSAC_1781  Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase [KO:K16305] [EC:4.1.2.13 2.2.1.11]
MSSAC_0390  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
MSSAC_0062  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
MSSAC_0047  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
MSSAC_2557  NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal [KO:K00150] [EC:1.2.1.59]
MSSAC_3452  NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal [KO:K00150] [EC:1.2.1.59]
MSSAC_1783  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
MSSAC_3178  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
MSSAC_2487  Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
MSSAC_1788  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
MSSAC_3741  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
MSSAC_0110  2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 [KO:K15635] [EC:5.4.2.12]
MSSAC_1354  Enolase [KO:K01689] [EC:4.2.1.11]
MSSAC_3627  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MSSAC_0536  Pyruvate,phosphate dikinase [KO:K01006] [EC:2.7.9.1]
MSSAC_2352  Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MSSAC_1782  Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MSSAC_4352  Pyruvate:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
MSSAC_4351  Pyruvate:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
MSSAC_2482  Pyruvate:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
MSSAC_4354  Pyruvate:ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
MSSAC_4353  Pyruvate:ferredoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
MSSAC_1786  2-oxoglutarate oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
MSSAC_2966  2-oxoglutarate oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
MSSAC_1785  2-oxoglutarate oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
MSSAC_2965  2-oxoglutarate oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
MSSAC_2724  Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [KO:K01895] [EC:6.2.1.1]
MSSAC_1119  Acetyl-CoA synthetase (ADP-forming) alpha chain [KO:K01905] [EC:6.2.1.13]
MSSAC_3192  Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative [KO:K22224] [EC:6.2.1.13]
MSSAC_1780  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
MSSAC_0227  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
msj00020  Citrate cycle (TCA cycle)
msj00030  Pentose phosphate pathway
msj00500  Starch and sucrose metabolism
msj00620  Pyruvate metabolism
msj00640  Propanoate metabolism
msj00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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