KEGG   PATHWAY: msz00010
Entry
msz00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Methanosarcina siciliae HI350
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
msz00010  Glycolysis / Gluconeogenesis
msz00010

Module
msz_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msz00010]
msz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msz00010]
msz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msz00010]
Other DBs
GO: 0006096 0006094
Organism
Methanosarcina siciliae HI350 [GN:msz]
Gene
MSSIH_0703  Glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
MSSIH_0989  ADP-dependent glucokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
MSSIH_0990  ADP-dependent phosphofructokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
MSSIH_2828  Fructose-1,6-bisphosphatase, GlpX type [KO:K02446] [EC:3.1.3.11]
MSSIH_3164  Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase [KO:K16305] [EC:4.1.2.13 2.2.1.11]
MSSIH_0055  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
MSSIH_0359  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
MSSIH_0040  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
MSSIH_2160  NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal [KO:K00150] [EC:1.2.1.59]
MSSIH_2980  NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal [KO:K00150] [EC:1.2.1.59]
MSSIH_1007  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
MSSIH_2078  Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
MSSIH_3277  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
MSSIH_0100  2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 [KO:K15635] [EC:5.4.2.12]
MSSIH_1527  2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type [KO:K15635] [EC:5.4.2.12]
MSSIH_1595  Enolase [KO:K01689] [EC:4.2.1.11]
MSSIH_3165  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MSSIH_0498  Pyruvate,phosphate dikinase [KO:K01006] [EC:2.7.9.1]
MSSIH_1955  Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MSSIH_3853  Pyruvate:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
MSSIH_2073  Pyruvate:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
MSSIH_3852  Pyruvate:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
MSSIH_3855  Pyruvate:ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
MSSIH_3854  Pyruvate:ferredoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
MSSIH_2604  2-oxoglutarate oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
MSSIH_2603  2-oxoglutarate oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
MSSIH_0329  Alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
MSSIH_1390  Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [KO:K01895] [EC:6.2.1.1]
MSSIH_1106  Acetyl-CoA synthetase (ADP-forming) alpha chain [KO:K01905] [EC:6.2.1.13]
MSSIH_1021  Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative [KO:K22224] [EC:6.2.1.13]
MSSIH_0196  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
msz00020  Citrate cycle (TCA cycle)
msz00030  Pentose phosphate pathway
msz00500  Starch and sucrose metabolism
msz00620  Pyruvate metabolism
msz00640  Propanoate metabolism
msz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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