KEGG   PATHWAY: nao00230
Entry
nao00230                    Pathway                                
Name
Purine metabolism - Nitrospirillum viridazoti
Class
Metabolism; Nucleotide metabolism
Pathway map
nao00230  Purine metabolism
nao00230

Module
nao_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:nao00230]
nao_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:nao00230]
nao_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nao00230]
nao_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:nao00230]
nao_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nao00230]
Other DBs
GO: 0006163 0042278
Organism
Nitrospirillum viridazoti [GN:nao]
Gene
Y958_03180  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
Y958_26800  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Y958_16960  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Y958_11260  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Y958_16880  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Y958_27690  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
Y958_06565  phosphoribosylformylglycinamidine synthase II [KO:K23269] [EC:6.3.5.3]
Y958_12440  phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
Y958_06570  phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
Y958_16885  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Y958_09760  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
Y958_09765  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
Y958_12445  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Y958_27685  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Y958_12460  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Y958_02280  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Y958_08590  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Y958_17595  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Y958_08875  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Y958_04605  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
Y958_16810  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Y958_13215  rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Y958_13040  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
Y958_22370  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
Y958_22375  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
Y958_24695  xanthine dehydrogenase [KO:K11177] [EC:1.17.1.4]
Y958_29535  xanthine dehydrogenase [KO:K11177] [EC:1.17.1.4]
Y958_24690  molybdopterin dehydrogenase [KO:K11178] [EC:1.17.1.4]
Y958_29530  FAD-binding molybdopterin dehydrogenase [KO:K11178] [EC:1.17.1.4]
Y958_24685  aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
Y958_29525  oxidoreductase [KO:K13483]
Y958_28600  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
Y958_04630  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
Y958_22405  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
Y958_16755  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Y958_02350  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Y958_03770  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
Y958_13995  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Y958_03780  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
Y958_29820  dGTPase [KO:K01129] [EC:3.1.5.1]
Y958_18160  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Y958_17460  phosphohydrolase [KO:K06952] [EC:3.1.3.89]
Y958_06985  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Y958_16940  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Y958_04595  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Y958_02320  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
Y958_14395  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
Y958_22275  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Y958_10965  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Y958_28475  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
Y958_05135  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
Y958_13885  2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Y958_09535  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
Y958_09125  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Y958_07735  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
Y958_17400  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Y958_17670  adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
Y958_17675  sulfate adenylyltransferase small subunit [KO:K00957] [EC:2.7.7.4]
Y958_22365  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Y958_22360  allantoinase [KO:K16842] [EC:3.5.2.5]
Y958_22350  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
Y958_22440  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
Y958_22435  urease subunit beta [KO:K01429] [EC:3.5.1.5]
Y958_22430  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
nao00030  Pentose phosphate pathway
nao00220  Arginine biosynthesis
nao00250  Alanine, aspartate and glutamate metabolism
nao00260  Glycine, serine and threonine metabolism
nao00340  Histidine metabolism
nao00630  Glyoxylate and dicarboxylate metabolism
nao00730  Thiamine metabolism
nao00740  Riboflavin metabolism
nao00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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