KEGG   PATHWAY: niv00230
Entry
niv00230                    Pathway                                
Name
Purine metabolism - Niveibacterium microcysteis
Class
Metabolism; Nucleotide metabolism
Pathway map
niv00230  Purine metabolism
niv00230

Module
niv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:niv00230]
niv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:niv00230]
niv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:niv00230]
niv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:niv00230]
niv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:niv00230]
niv_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:niv00230]
niv_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:niv00230]
Other DBs
GO: 0006163 0042278
Organism
Niveibacterium microcysteis [GN:niv]
Gene
JY500_01405  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
JY500_12655  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
JY500_14255  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
JY500_14550  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
JY500_03025  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
JY500_12920  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
JY500_17470  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
JY500_08670  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
JY500_07285  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
JY500_14750  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
JY500_09665  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
JY500_03615  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
JY500_03620  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
JY500_16780  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
JY500_04775  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
JY500_17460  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
JY500_18615  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
JY500_08385  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
JY500_11585  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
JY500_08235  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
JY500_07500  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
JY500_13310  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
JY500_18610  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
JY500_11315  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
JY500_15615  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
JY500_01540  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
JY500_05280  xpt; xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
JY500_10795  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
JY500_10800  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
JY500_11310  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
JY500_10520  GMP reductase [KO:K00364] [EC:1.7.1.7]
JY500_10830  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
JY500_01565  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
JY500_12550  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
JY500_16250  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
JY500_16245  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
JY500_18365  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
JY500_20285  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
JY500_08745  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K21138] [EC:3.1.7.2]
JY500_01570  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
JY500_11070  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JY500_11080  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K00951] [EC:2.7.6.5]
JY500_08760  hypothetical protein [KO:K07816] [EC:2.7.6.5]
JY500_04470  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
JY500_15540  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
JY500_02960  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
JY500_20560  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
JY500_05185  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
JY500_07435  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
JY500_17300  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
JY500_17065  sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
JY500_17060  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
JY500_10910  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
JY500_10905  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
JY500_10920  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
JY500_10925  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
JY500_10930  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
JY500_02360  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
JY500_02365  urease subunit beta [KO:K01429] [EC:3.5.1.5]
JY500_02380  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
niv00030  Pentose phosphate pathway
niv00220  Arginine biosynthesis
niv00250  Alanine, aspartate and glutamate metabolism
niv00260  Glycine, serine and threonine metabolism
niv00340  Histidine metabolism
niv00630  Glyoxylate and dicarboxylate metabolism
niv00730  Thiamine metabolism
niv00740  Riboflavin metabolism
niv00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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