KEGG   PATHWAY: nto00240
Entry
nto00240                    Pathway                                
Name
Pyrimidine metabolism - Nicotiana tomentosiformis
Class
Metabolism; Nucleotide metabolism
Pathway map
nto00240  Pyrimidine metabolism
nto00240

Module
nto_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:nto00240]
nto_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nto00240]
nto_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nto00240]
nto_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nto00240]
Other DBs
GO: 0006220 0006213
Organism
Nicotiana tomentosiformis [GN:nto]
Gene
104088841  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
104103847  carbamoyl-phosphate synthase small chain, chloroplastic isoform X1 [KO:K01956] [EC:6.3.5.5]
104108348  aspartate carbamoyltransferase 1, chloroplastic [KO:K00609] [EC:2.1.3.2]
104115335  dihydroorotase, mitochondrial isoform X1 [KO:K01465] [EC:3.5.2.3]
104116551  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
104101167  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
104088482  probable UMP-CMP kinase 2 [KO:K13800] [EC:2.7.4.14]
104116150  UMP-CMP kinase 3-like isoform X2 [KO:K13800] [EC:2.7.4.14]
104099261  UMP-CMP kinase 3 isoform X1 [KO:K13800] [EC:2.7.4.14]
104117286  uncharacterized protein LOC104117286 [KO:K09903] [EC:2.7.4.22]
104094707  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
104116781  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
104098233  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
104101181  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
104092117  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
104097525  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
104103456  nucleoside diphosphate kinase-like [KO:K00940] [EC:2.7.4.6]
104109227  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
104114034  apyrase 2-like [KO:K14641] [EC:3.6.1.5]
104116308  apyrase-like [KO:K14641] [EC:3.6.1.5]
104108290  apyrase-like [KO:K14641] [EC:3.6.1.5]
104110726  apyrase 1-like [KO:K14641] [EC:3.6.1.5]
104094337  ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
104085848  nudix hydrolase 25 isoform X1 [KO:K26955] [EC:3.6.1.17]
104115211  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
104089520  CTP synthase-like isoform X1 [KO:K01937] [EC:6.3.4.2]
104099267  CTP synthase isoform X2 [KO:K01937] [EC:6.3.4.2]
104087542  CTP synthase-like isoform X1 [KO:K01937] [EC:6.3.4.2]
104105967  uridine kinase-like protein 5 [KO:K00876] [EC:2.7.1.48]
104112682  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
104119522  uridine kinase-like protein 4 isoform X1 [KO:K00876] [EC:2.7.1.48]
104089162  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
104105802  uridine-cytidine kinase C-like isoform X1 [KO:K00876] [EC:2.7.1.48]
104102004  uridine-cytidine kinase C isoform X1 [KO:K00876] [EC:2.7.1.48]
104111966  uridine-cytidine kinase C-like isoform X1 [KO:K00876] [EC:2.7.1.48]
104108863  uncharacterized protein LOC104108863 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
104086340  uncharacterized protein LOC104086340 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
104109850  uncharacterized protein LOC104109850 isoform X2 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
104111622  uncharacterized protein LOC104111622 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
104104013  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
104113098  probable uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
104111135  uridine nucleosidase 1-like [KO:K01240] [EC:3.2.2.3]
104103315  uridine kinase-like protein 4 [KO:K00761] [EC:2.4.2.9]
104112310  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
104102126  uncharacterized protein LOC104102126 [KO:K16329] [EC:4.2.1.70]
104090443  cytosolic 5'-nucleotidase 3 [KO:K24242] [EC:3.1.3.91]
104098675  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
104091603  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
104111756  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
104112191  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
104113637  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
104087000  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
104097054  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
104102260  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
104102261  dCTP pyrophosphatase 1-like isoform X2 [KO:K16904] [EC:3.6.1.12]
104116891  HD domain-containing protein 2 homolog [KO:K07023] [EC:3.1.3.89]
104103450  HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
104109396  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
104096449  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
104090547  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
104093706  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
104098261  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
104085545  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
104101172  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
104105538  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
104118980  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
104086368  dihydropyrimidinase isoform X1 [KO:K01464] [EC:3.5.2.2]
104110236  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
nto00030  Pentose phosphate pathway
nto00220  Arginine biosynthesis
nto00250  Alanine, aspartate and glutamate metabolism
nto00280  Valine, leucine and isoleucine degradation
nto00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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