KEGG   PATHWAY: oek00230
Entry
oek00230                    Pathway                                
Name
Purine metabolism - Oerskovia sp. KBS0722
Class
Metabolism; Nucleotide metabolism
Pathway map
oek00230  Purine metabolism
oek00230

Module
oek_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:oek00230]
oek_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:oek00230]
oek_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:oek00230]
oek_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:oek00230]
oek_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:oek00230]
Other DBs
GO: 0006163 0042278
Organism
Oerskovia sp. KBS0722 [GN:oek]
Gene
FFI11_012970  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
FFI11_005260  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
FFI11_018955  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
FFI11_006225  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
FFI11_005890  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
FFI11_009140  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
FFI11_006020  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
FFI11_005910  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
FFI11_005915  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
FFI11_006230  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
FFI11_018195  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
FFI11_018190  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
FFI11_005895  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
FFI11_002120  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
FFI11_009160  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
FFI11_014015  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
FFI11_016995  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
FFI11_006215  ExeM/NucH family extracellular endonuclease [KO:K01081] [EC:3.1.3.5]
FFI11_015135  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
FFI11_005825  HAD family hydrolase [KO:K02566] [EC:3.1.3.5]
FFI11_016520  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
FFI11_011715  laccase domain-containing protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
FFI11_000535  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
FFI11_008890  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
FFI11_008905  GuaB3 family IMP dehydrogenase-related protein [KO:K00088] [EC:1.1.1.205]
FFI11_011065  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
FFI11_016200  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
FFI11_009005  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
FFI11_014165  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
FFI11_000105  type 1 glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
FFI11_014425  GuaB1 family IMP dehydrogenase-related protein [KO:K26110] [EC:1.7.1.7]
FFI11_013800  guanylate kinase [KO:K00942] [EC:2.7.4.8]
FFI11_017545  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
FFI11_017535  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
FFI11_014175  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
FFI11_015520  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
FFI11_014010  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
FFI11_018700  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
FFI11_002160  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
FFI11_015890  GTP pyrophosphokinase family protein [KO:K07816] [EC:2.7.6.5]
FFI11_016405  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
FFI11_017740  CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
FFI11_005865  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
FFI11_016545  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
FFI11_008465  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
FFI11_010065  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
FFI11_008695  adenylate kinase [KO:K00939] [EC:2.7.4.3]
FFI11_014090  HIT domain-containing protein [KO:K19710] [EC:2.7.7.53]
FFI11_009070  sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
FFI11_009075  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
oek00030  Pentose phosphate pathway
oek00220  Arginine biosynthesis
oek00250  Alanine, aspartate and glutamate metabolism
oek00260  Glycine, serine and threonine metabolism
oek00340  Histidine metabolism
oek00630  Glyoxylate and dicarboxylate metabolism
oek00730  Thiamine metabolism
oek00740  Riboflavin metabolism
oek00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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