KEGG   PATHWAY: pbk00240
Entry
pbk00240                    Pathway                                
Name
Pyrimidine metabolism - Paenibacillus baekrokdamisoli
Class
Metabolism; Nucleotide metabolism
Pathway map
pbk00240  Pyrimidine metabolism
pbk00240

Module
pbk_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pbk00240]
pbk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pbk00240]
pbk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pbk00240]
Other DBs
GO: 0006220 0006213
Organism
Paenibacillus baekrokdamisoli [GN:pbk]
Gene
Back11_25330  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
Back11_63590  hypothetical protein [KO:K01955] [EC:6.3.5.5]
Back11_25340  pyrAA; carbamoyl-phosphate synthase pyrimidine-specific small chain [KO:K01956] [EC:6.3.5.5]
Back11_25360  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
Back11_31020  aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
Back11_25350  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
Back11_06800  pyrD; dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
Back11_25310  pyrE_1; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
Back11_31990  pyrE_2; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
Back11_25320  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
Back11_21860  smbA; uridylate kinase [KO:K09903] [EC:2.7.4.22]
Back11_50720  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
Back11_23360  ndk_1; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Back11_61110  ndk_2; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Back11_05940  Maf-like protein [KO:K06287] [EC:3.6.1.-]
Back11_45110  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
Back11_23640  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
Back11_28600  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
Back11_43430  hypothetical protein [KO:K08693] [EC:3.1.4.16 3.1.3.6 3.1.3.5]
Back11_61290  UPF0345 protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Back11_51880  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
Back11_25370  pyrR; bifunctional protein PyrR [KO:K02825] [EC:2.4.2.9]
Back11_21400  ymdB; hypothetical protein [KO:K09769] [EC:3.1.4.16]
Back11_13510  pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
Back11_26190  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
Back11_39280  dcd_1; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
Back11_39290  dcd_2; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
Back11_08140  hypothetical protein [KO:K00525] [EC:1.17.4.1]
Back11_62550  nrdE; ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
Back11_62540  nrdF; ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
Back11_00820  5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
Back11_26780  deaminase [KO:K01493] [EC:3.5.4.12]
Back11_47170  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
Back11_21650  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
Back11_13450  tdk2; thymidine kinase [KO:K00857] [EC:2.7.1.21]
Back11_12650  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Back11_38080  luciferase [KO:K09018] [EC:1.14.99.46]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
pbk00030  Pentose phosphate pathway
pbk00220  Arginine biosynthesis
pbk00250  Alanine, aspartate and glutamate metabolism
pbk00280  Valine, leucine and isoleucine degradation
pbk00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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