KEGG   PATHWAY: pcm00230
Entry
pcm00230                    Pathway                                
Name
Purine metabolism - Pedobacter cryoconitis
Class
Metabolism; Nucleotide metabolism
Pathway map
pcm00230  Purine metabolism
pcm00230

Module
pcm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pcm00230]
pcm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pcm00230]
pcm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pcm00230]
pcm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pcm00230]
pcm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pcm00230]
Other DBs
GO: 0006163 0042278
Organism
Pedobacter cryoconitis [GN:pcm]
Gene
AY601_0005  DNA mismatch repair protein MutT [KO:K01515] [EC:3.6.1.13 3.6.1.-]
AY601_3902  DNA mismatch repair protein MutT [KO:K01515] [EC:3.6.1.13 3.6.1.-]
AY601_2271  Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AY601_3649  Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
AY601_3361  Amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
AY601_3860  Phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
AY601_3455  Formyl transferase domain protein [KO:K11175] [EC:2.1.2.2]
AY601_1956  Phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
AY601_0346  Phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
AY601_1691  Phosphoribosylaminoimidazole carboxylase [KO:K01589] [EC:6.3.4.18]
AY601_1727  Phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
AY601_0360  Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
AY601_3456  Phosphoribosylaminoimidazolecarboxamide formyltransferase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
AY601_3436  Adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
AY601_1326  Metallophosphoesterase [KO:K01081] [EC:3.1.3.5]
AY601_2697  hypothetical protein [KO:K01081] [EC:3.1.3.5]
AY601_3263  5'(3')-deoxyribonucleotidase [KO:K01081] [EC:3.1.3.5]
AY601_4882  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AY601_3582  Purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
AY601_1715  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
AY601_4170  Hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
AY601_2530  Inosine-5-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
AY601_1123  inosine-5-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
AY601_3673  Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
AY601_3697  deoxyribonucleotide triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
AY601_3357  GMP synthase [KO:K01951] [EC:6.3.5.2]
AY601_4320  Guanylate kinase [KO:K00942] [EC:2.7.4.8]
AY601_1683  Ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
AY601_3554  Ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
AY601_1682  Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
AY601_3555  Ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
AY601_2246  Dehydrogenase [KO:K01129] [EC:3.1.5.1]
AY601_3283  MFS transporter [KO:K01139] [EC:2.7.6.5 3.1.7.2]
AY601_2497  Exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
AY601_0107  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
AY601_2587  Adenylate/guanylate cyclase [KO:K01768] [EC:4.6.1.1]
AY601_2628  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
AY601_3285  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
AY601_1896  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
AY601_0640  Deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
AY601_1208  Adenosine deaminase [KO:K01488] [EC:3.5.4.4]
AY601_0242  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
AY601_5038  Adenylate kinase [KO:K00939] [EC:2.7.4.3]
AY601_0989  hypothetical protein [KO:K03651] [EC:3.1.4.53]
AY601_2445  Sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
AY601_2446  Sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pcm00030  Pentose phosphate pathway
pcm00220  Arginine biosynthesis
pcm00250  Alanine, aspartate and glutamate metabolism
pcm00260  Glycine, serine and threonine metabolism
pcm00340  Histidine metabolism
pcm00630  Glyoxylate and dicarboxylate metabolism
pcm00730  Thiamine metabolism
pcm00740  Riboflavin metabolism
pcm00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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