KEGG   PATHWAY: pdd00230
Entry
pdd00230                    Pathway                                
Name
Purine metabolism - Pseudoxanthomonas daejeonensis
Class
Metabolism; Nucleotide metabolism
Pathway map
pdd00230  Purine metabolism
pdd00230

Module
pdd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pdd00230]
pdd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pdd00230]
pdd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pdd00230]
pdd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pdd00230]
pdd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pdd00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudoxanthomonas daejeonensis [GN:pdd]
Gene
MNQ95_02845  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
MNQ95_10515  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
MNQ95_05595  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
MNQ95_09795  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
MNQ95_02695  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
MNQ95_02235  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
MNQ95_04120  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
MNQ95_12120  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
MNQ95_01650  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
MNQ95_09935  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
MNQ95_12125  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
MNQ95_11110  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
MNQ95_11105  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
MNQ95_09460  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
MNQ95_13070  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
MNQ95_04110  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
MNQ95_14910  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
MNQ95_14830  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
MNQ95_10840  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
MNQ95_03140  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
MNQ95_15400  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
MNQ95_14980  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
MNQ95_15050  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
MNQ95_03300  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
MNQ95_07150  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
MNQ95_14975  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
MNQ95_03280  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
MNQ95_06290  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
MNQ95_08780  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
MNQ95_06280  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
MNQ95_03070  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
MNQ95_01365  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
MNQ95_03075  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K00951] [EC:2.7.6.5]
MNQ95_14090  TIR domain-containing protein [KO:K01768] [EC:4.6.1.1]
MNQ95_15385  CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
MNQ95_01960  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
MNQ95_05035  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
MNQ95_11140  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
MNQ95_03790  adenylate kinase [KO:K00939] [EC:2.7.4.3]
MNQ95_10525  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
MNQ95_03200  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
MNQ95_03610  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
MNQ95_03615  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pdd00030  Pentose phosphate pathway
pdd00220  Arginine biosynthesis
pdd00250  Alanine, aspartate and glutamate metabolism
pdd00260  Glycine, serine and threonine metabolism
pdd00340  Histidine metabolism
pdd00630  Glyoxylate and dicarboxylate metabolism
pdd00730  Thiamine metabolism
pdd00740  Riboflavin metabolism
pdd00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system