KEGG   PATHWAY: pfor00030
Entry
pfor00030                   Pathway                                
Name
Pentose phosphate pathway - Poecilia formosa (Amazon molly)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pfor00030  Pentose phosphate pathway
pfor00030

Module
pfor_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfor00030]
pfor_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pfor00030]
pfor_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfor00030]
pfor_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfor00030]
Other DBs
GO: 0006098
Organism
Poecilia formosa (Amazon molly) [GN:pfor]
Gene
103138058  gpi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
103130839  glucose-6-phosphate isomerase-like [KO:K01810] [EC:5.3.1.9]
103141164  glucose-6-phosphate 1-dehydrogenase-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
103141207  glucose-6-phosphate 1-dehydrogenase-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
103147817  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
103152011  pgls; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
103137123  h6pd; GDH/6PGL endoplasmic bifunctional protein [KO:K13937] [EC:1.1.1.47 3.1.1.31]
103138912  pgd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
103134215  ribulose-phosphate 3-epimerase-like [KO:K01783] [EC:5.1.3.1]
103138147  transketolase-like [KO:K00615] [EC:2.2.1.1]
103156031  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
103149648  transketolase-like [KO:K00615] [EC:2.2.1.1]
103149695  taldo1; transaldolase [KO:K00616] [EC:2.2.1.2]
103149416  rpia; ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
103133857  shpk; sedoheptulokinase isoform X1 [KO:K11214] [EC:2.7.1.14]
103129865  dera; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
103154221  rbks; ribokinase [KO:K00852] [EC:2.7.1.15]
103140008  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
103137221  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
103137926  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
103151924  prps2; ribose-phosphate pyrophosphokinase 2 [KO:K00948] [EC:2.7.6.1]
103135621  prps1; ribose-phosphate pyrophosphokinase 1 isoform X1 [KO:K00948] [EC:2.7.6.1]
103129453  rgn; regucalcin [KO:K01053] [EC:3.1.1.17]
103135394  idnk; probable gluconokinase isoform X1 [KO:K00851] [EC:2.7.1.12]
103136841  glyctk; glycerate kinase [KO:K11529] [EC:2.7.1.165]
103152327  fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
103148544  fructose-bisphosphate aldolase C-like [KO:K01623] [EC:4.1.2.13]
103148562  fructose-bisphosphate aldolase C-like [KO:K01623] [EC:4.1.2.13]
103140917  aldoc; fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
103135503  fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
103135473  fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
103135452  fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
103135872  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
103137958  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X7 [KO:K00850] [EC:2.7.1.11]
103138027  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X1 [KO:K00850] [EC:2.7.1.11]
103141185  ATP-dependent 6-phosphofructokinase, muscle type-like [KO:K00850] [EC:2.7.1.11]
103147648  ATP-dependent 6-phosphofructokinase, muscle type-like [KO:K00850] [EC:2.7.1.11]
103155779  pfkl; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
103143367  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X6 [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
pfor00010  Glycolysis / Gluconeogenesis
pfor00040  Pentose and glucuronate interconversions
pfor00052  Galactose metabolism
pfor00230  Purine metabolism
pfor00240  Pyrimidine metabolism
pfor00340  Histidine metabolism
pfor00630  Glyoxylate and dicarboxylate metabolism
pfor00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

DBGET integrated database retrieval system