KEGG   PATHWAY: pfuw00310
Entry
pfuw00310                   Pathway                                
Name
Lysine degradation - Pseudomonas furukawaii
Class
Metabolism; Amino acid metabolism
Pathway map
pfuw00310  Lysine degradation
pfuw00310

Module
pfuw_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pfuw00310]
pfuw_M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate [PATH:pfuw00310]
Other DBs
GO: 0006554
Organism
Pseudomonas furukawaii [GN:pfuw]
Gene
KF707C_29440  L-pipecolate dehydrogenase [KO:K26061]
KF707C_51680  aldehyde dehydrogenase B [KO:K26061]
KF707C_29460  gamma-aminobutyrate [KO:K26062] [EC:2.6.1.39]
KF707C_33970  dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex [KO:K00658] [EC:2.3.1.61]
KF707C_33960  dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase [KO:K00382] [EC:1.8.1.4]
KF707C_1100  glutaryl-CoA dehydrogenase [KO:K00252] [EC:1.3.8.6]
KF707C_30420  phenylacetate degradation enoyl-CoA hydratase PaaA [KO:K01692] [EC:4.2.1.17]
KF707C_30290  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
KF707C_25230  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
KF707C_34520  enoyl-CoA hydratase [KO:K01825] [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
KF707C_33260  enoyl-CoA hydratase [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
KF707C_32490  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_33270  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_37900  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_38300  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_48970  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_50680  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_12010  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_12120  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_20930  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_23020  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KF707C_25210  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KF707C_40650  aminotransferase [KO:K18201] [EC:2.7.1.81]
KF707C_4430  lysine 2-monooxygenase [KO:K00468] [EC:1.13.12.2]
KF707C_4420  5-aminopentanamidase [KO:K01506] [EC:3.5.1.30]
KF707C_52750  aspartate racemase [KO:K25316] [EC:5.1.1.10]
KF707C_33410  4-aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
KF707C_45880  4-aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
KF707C_45930  4-aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
KF707C_41160  gamma-aminobutyrate:alpha-ketoglutarate aminotransferase [KO:K14268] [EC:2.6.1.48 2.6.1.19]
KF707C_1190  5-aminovalerate aminotransferase [KO:K14268] [EC:2.6.1.48 2.6.1.19]
KF707C_14180  gamma-aminobutyrate [KO:K14268] [EC:2.6.1.48 2.6.1.19]
KF707C_41170  glutarate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
KF707C_1170  glutarate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
KF707C_14170  glutarate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
KF707C_41190  carbon starvation induced protein CsiD [KO:K15737] [EC:1.14.11.64]
KF707C_14030  carbon starvation induced protein CsiD [KO:K15737] [EC:1.14.11.64]
KF707C_41180  L-2-hydroxyglutarate oxidase [KO:K15736] [EC:1.1.5.13]
KF707C_14040  L-2-hydroxyglutarate oxidase [KO:K15736] [EC:1.1.5.13]
KF707C_29480  hypothetical protein [KO:K25986] [EC:1.13.11.93]
KF707C_29470  Fe-S protein [KO:K26063] [EC:1.1.-.-]
KF707C_1110  L-carnitine dehydratase [KO:K01041] [EC:2.8.3.-]
KF707C_2200  D-amino acid dehydrogenase small subunit [KO:K26064]
KF707C_2150  delta 1-piperideine-2-carboxylate reductase [KO:K13609] [EC:1.5.1.21]
KF707C_24890  ureidoglycolate/malate/sulfolactate dehydrogenase family [KO:K13609] [EC:1.5.1.21]
KF707C_29420  L-pipecolate oxidase [KO:K26065]
KF707C_51670  L-pipecolate oxidase [KO:K26065]
KF707C_25940  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
KF707C_29960  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
pfuw00020  Citrate cycle (TCA cycle)
pfuw00300  Lysine biosynthesis
pfuw00780  Biotin metabolism
KO pathway
ko00310   
LinkDB

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