KEGG   PATHWAY: phe00230
Entry
phe00230                    Pathway                                
Name
Purine metabolism - Pedobacter heparinus
Class
Metabolism; Nucleotide metabolism
Pathway map
phe00230  Purine metabolism
phe00230

Module
phe_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:phe00230]
phe_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:phe00230]
phe_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:phe00230]
phe_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:phe00230]
Other DBs
GO: 0006163 0042278
Organism
Pedobacter heparinus [GN:phe]
Gene
Phep_3605  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
Phep_2334  Glucose-1,6-bisphosphate synthase [KO:K01835] [EC:5.4.2.2]
Phep_0582  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Phep_0267  phosphoribosylamine/glycine ligase [KO:K01945] [EC:6.3.4.13]
Phep_0810  formyl transferase domain protein [KO:K11175] [EC:2.1.2.2]
Phep_2973  Phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Phep_2978  Phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Phep_1898  phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Phep_1897  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Phep_1864  Phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Phep_2933  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Phep_0809  phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Phep_0836  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Phep_2185  metallophosphoesterase [KO:K01081] [EC:3.1.3.5]
Phep_3862  5 nucleotidase deoxy cytosolic type C [KO:K01081] [EC:3.1.3.5]
Phep_3500  stationary-phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Phep_3515  stationary-phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Phep_0089  HAD-superfamily hydrolase, subfamily IIA [KO:K02566] [EC:3.1.3.5]
Phep_0646  purine nucleoside phosphorylase I, inosine and guanosine-specific [KO:K03783] [EC:2.4.2.1]
Phep_1041  conserved hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Phep_0044  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Phep_1594  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Phep_0538  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Phep_0492  non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Phep_0993  GMP synthase, large subunit [KO:K01951] [EC:6.3.5.2]
Phep_0860  CMP/dCMP deaminase zinc-binding [KO:K01487] [EC:3.5.4.3]
Phep_4197  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Phep_0691  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
Phep_0690  Ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
Phep_2365  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Phep_1204  RelA/SpoT family protein [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Phep_1637  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Phep_3210  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Phep_1202  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Phep_2581  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
Phep_3079  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Phep_3381  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Phep_2956  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Phep_2873  histidine triad (HIT) protein [KO:K19710] [EC:2.7.7.53]
Phep_3087  sulfate adenylyltransferase, large subunit [KO:K00956] [EC:2.7.7.4]
Phep_3088  sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
phe00030  Pentose phosphate pathway
phe00220  Arginine biosynthesis
phe00250  Alanine, aspartate and glutamate metabolism
phe00260  Glycine, serine and threonine metabolism
phe00340  Histidine metabolism
phe00630  Glyoxylate and dicarboxylate metabolism
phe00730  Thiamine metabolism
phe00740  Riboflavin metabolism
phe00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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