KEGG   PATHWAY: psuu00630
Entry
psuu00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Phytohabitans suffuscus
Class
Metabolism; Carbohydrate metabolism
Pathway map
psuu00630  Glyoxylate and dicarboxylate metabolism
psuu00630

Module
psuu_M00012  Glyoxylate cycle [PATH:psuu00630]
psuu_M00621  Glycine cleavage system [PATH:psuu00630]
psuu_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:psuu00630]
Other DBs
GO: 0046487 0043648
Organism
Phytohabitans suffuscus [GN:psuu]
Gene
Psuf_074340  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Psuf_037310  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Psuf_074330  aceB_2; malate synthase [KO:K01638] [EC:2.3.3.9]
Psuf_011960  aceB_1; malate synthase [KO:K01638] [EC:2.3.3.9]
Psuf_041880  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Psuf_037990  hypothetical protein [KO:K01647] [EC:2.3.3.1]
Psuf_038000  hypothetical protein [KO:K01647] [EC:2.3.3.1]
Psuf_088700  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
Psuf_007070  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
Psuf_034250  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Psuf_042650  atoB_1; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Psuf_047010  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Psuf_059250  atoB_2; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Psuf_001530  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Psuf_093900  hypothetical protein [KO:K00626] [EC:2.3.1.9]
Psuf_058960  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
Psuf_059230  hypothetical protein [KO:K00023] [EC:1.1.1.36]
Psuf_066920  adhP_1; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
Psuf_073520  adhP_2; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
Psuf_047000  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Psuf_011770  hypothetical protein [KO:K05606] [EC:5.1.99.1]
Psuf_019490  methylmalonyl-CoA mutase [KO:K14447] [EC:5.4.99.63]
Psuf_025370  hypothetical protein [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Psuf_025590  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Psuf_000270  putative propionyl-CoA carboxylase beta chain 6 [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Psuf_014590  putative propionyl-CoA carboxylase beta chain 6 [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Psuf_016750  hypothetical protein [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Psuf_074060  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
Psuf_074020  hypothetical protein [KO:K01849] [EC:5.4.99.2]
Psuf_074040  hypothetical protein [KO:K01848] [EC:5.4.99.2]
Psuf_036720  glcD; FAD-binding protein [KO:K00104] [EC:1.1.99.14]
Psuf_028420  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
Psuf_036030  hypothetical protein [KO:K11472] [EC:1.1.99.14]
Psuf_036710  FAD-linked oxidase [KO:K11472] [EC:1.1.99.14]
Psuf_036700  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
Psuf_037810  hydrolase [KO:K01091] [EC:3.1.3.18]
Psuf_059740  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
Psuf_017090  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
Psuf_049890  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Psuf_003960  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Psuf_013770  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Psuf_013910  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Psuf_047900  glyA_2; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Psuf_019700  glyA_1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Psuf_087600  gcvP; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
Psuf_013470  hypothetical protein [KO:K00605] [EC:2.1.2.10]
Psuf_013520  hypothetical protein [KO:K00382] [EC:1.8.1.4]
Psuf_088530  pdhD_2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Psuf_087660  gcvH; glycine cleavage system H protein [KO:K02437]
Psuf_076080  6-phosphogluconate dehydrogenase [KO:K00042] [EC:1.1.1.60]
Psuf_013750  aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Psuf_022630  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Psuf_044190  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
Psuf_082880  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Psuf_054500  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
psuu00010  Glycolysis / Gluconeogenesis
psuu00020  Citrate cycle (TCA cycle)
psuu00030  Pentose phosphate pathway
psuu00053  Ascorbate and aldarate metabolism
psuu00071  Fatty acid degradation
psuu00230  Purine metabolism
psuu00250  Alanine, aspartate and glutamate metabolism
psuu00260  Glycine, serine and threonine metabolism
psuu00620  Pyruvate metabolism
psuu00710  Carbon fixation by Calvin cycle
psuu00750  Vitamin B6 metabolism
psuu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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