KEGG   PATHWAY: qlo00240
Entry
qlo00240                    Pathway                                
Name
Pyrimidine metabolism - Quercus lobata (valley oak)
Class
Metabolism; Nucleotide metabolism
Pathway map
qlo00240  Pyrimidine metabolism
qlo00240

Module
qlo_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:qlo00240]
qlo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:qlo00240]
qlo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:qlo00240]
qlo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:qlo00240]
Other DBs
GO: 0006220 0006213
Organism
Quercus lobata (valley oak) [GN:qlo]
Gene
115989082  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
115995429  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
115958237  aspartate carbamoyltransferase 2, chloroplastic-like isoform X1 [KO:K00609] [EC:2.1.3.2]
115993846  aspartate carbamoyltransferase 2, chloroplastic-like [KO:K00609] [EC:2.1.3.2]
115954540  dihydroorotase, mitochondrial-like isoform X1 [KO:K01465] [EC:3.5.2.3]
115994238  dihydroorotate dehydrogenase (quinone), mitochondrial-like isoform X1 [KO:K00254] [EC:1.3.5.2]
115981919  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
115986682  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
115987785  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
115960918  UMP-CMP kinase isoform X1 [KO:K13800] [EC:2.7.4.14]
115986970  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
115995127  uncharacterized protein LOC115995127 [KO:K09903] [EC:2.7.4.22]
115962577  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
115986966  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
115975284  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
115982692  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
115982805  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
115953594  apyrase 1-like [KO:K14641] [EC:3.6.1.5]
115976124  ectonucleotide pyrophosphatase/phosphodiesterase family member 3 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
115973499  nudix hydrolase 25 isoform X1 [KO:K26955] [EC:3.6.1.17]
115968094  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
115968131  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
115986659  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
115970872  CTP synthase-like isoform X1 [KO:K01937] [EC:6.3.4.2]
115976455  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
115963079  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
115963621  inorganic pyrophosphatase TTM1-like [KO:K00876] [EC:2.7.1.48]
115981985  inorganic pyrophosphatase TTM2-like isoform X1 [KO:K00876] [EC:2.7.1.48]
115954796  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
115976096  uncharacterized protein LOC115976096 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
115994823  uncharacterized protein LOC115994823 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
115991988  uncharacterized protein LOC115991988 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
115963100  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
115963533  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
115954145  uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
115963077  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
115979365  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
115954249  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
115981698  uncharacterized protein LOC115981698 isoform X1 [KO:K16329] [EC:4.2.1.70]
115987097  7-methylguanosine phosphate-specific 5'-nucleotidase A isoform X1 [KO:K24242] [EC:3.1.3.91]
115976128  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
115994875  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
115976434  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
115950907  ribonucleoside-diphosphate reductase small chain A isoform X1 [KO:K10808] [EC:1.17.4.1]
115965510  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
115965604  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
115950632  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
115950857  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
115959133  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
115977317  HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
115965343  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
115973742  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
115975121  thymidylate kinase-like isoform X1 [KO:K00943] [EC:2.7.4.9]
115974310  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
115974319  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
115954799  thymidine kinase a [KO:K00857] [EC:2.7.1.21]
115989270  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
115959174  thymidine kinase a-like isoform X1 [KO:K00857] [EC:2.7.1.21]
115992919  thymidine kinase a-like isoform X1 [KO:K00857] [EC:2.7.1.21]
115967528  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
115974377  bifunctional dihydrofolate reductase-thymidylate synthase-like isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
115965329  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
115981310  dihydropyrimidinase-like isoform X1 [KO:K01464] [EC:3.5.2.2]
115989690  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
115969398  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
qlo00030  Pentose phosphate pathway
qlo00220  Arginine biosynthesis
qlo00250  Alanine, aspartate and glutamate metabolism
qlo00280  Valine, leucine and isoleucine degradation
qlo00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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