KEGG   PATHWAY: rbm00630
Entry
rbm00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobiales bacterium NRL2
Class
Metabolism; Carbohydrate metabolism
Pathway map
rbm00630  Glyoxylate and dicarboxylate metabolism
rbm00630

Module
rbm_M00621  Glycine cleavage system [PATH:rbm00630]
rbm_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rbm00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobiales bacterium NRL2 [GN:rbm]
Gene
TEF_09515  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
TEF_01320  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
TEF_01590  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
TEF_19555  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
TEF_17900  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
TEF_11050  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
TEF_08935  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
TEF_13430  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
TEF_18780  hypothetical protein [KO:K00626] [EC:2.3.1.9]
TEF_02180  hypothetical protein [KO:K00626] [EC:2.3.1.9]
TEF_06685  hypothetical protein [KO:K00626] [EC:2.3.1.9]
TEF_02245  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_07440  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_05470  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_01280  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_08495  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_04130  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_13445  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_15875  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TEF_07435  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
TEF_15880  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
TEF_16395  hypothetical protein [KO:K17865] [EC:4.2.1.55]
TEF_02605  monoamine oxidase [KO:K17865] [EC:4.2.1.55]
TEF_02600  phosphate acetyltransferase [KO:K17865] [EC:4.2.1.55]
TEF_03480  crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
TEF_10610  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
TEF_03475  protein meaA [KO:K14447] [EC:5.4.99.63]
TEF_03545  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
TEF_04290  hypothetical protein [KO:K14449] [EC:4.2.1.148]
TEF_05695  malyl-CoA lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
TEF_05555  acetyl/propionyl-CoA carboxylase subuit alpha [KO:K01965] [EC:6.4.1.3]
TEF_21095  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
TEF_13160  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
TEF_19400  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
TEF_19395  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
TEF_09935  catalase HPII [KO:K03781] [EC:1.11.1.6]
TEF_02065  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
TEF_04765  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
TEF_02090  hypothetical protein [KO:K01091] [EC:3.1.3.18]
TEF_21105  hypothetical protein [KO:K01091] [EC:3.1.3.18]
TEF_05510  hypothetical protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
TEF_12270  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
TEF_17815  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
TEF_07740  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
TEF_21390  glycine dehydrogenase (aminomethyl-transferring) [KO:K00282] [EC:1.4.4.2]
TEF_21385  glycine dehydrogenase (aminomethyl-transferring) [KO:K00283] [EC:1.4.4.2]
TEF_21400  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
TEF_09665  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TEF_19580  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TEF_21395  glycine cleavage system protein H [KO:K02437]
TEF_04425  hypothetical protein [KO:K01816] [EC:5.3.1.22]
TEF_18155  hypothetical protein [KO:K11529] [EC:2.7.1.165]
TEF_17835  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
TEF_17845  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
TEF_12375  hypothetical protein [KO:K01432] [EC:3.5.1.9]
TEF_10035  AMP-dependent synthetase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rbm00010  Glycolysis / Gluconeogenesis
rbm00020  Citrate cycle (TCA cycle)
rbm00030  Pentose phosphate pathway
rbm00053  Ascorbate and aldarate metabolism
rbm00071  Fatty acid degradation
rbm00230  Purine metabolism
rbm00250  Alanine, aspartate and glutamate metabolism
rbm00260  Glycine, serine and threonine metabolism
rbm00620  Pyruvate metabolism
rbm00710  Carbon fixation by Calvin cycle
rbm00750  Vitamin B6 metabolism
rbm00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system