KEGG   PATHWAY: rsb00230
Entry
rsb00230                    Pathway                                
Name
Purine metabolism - Rhodoferax saidenbachensis
Class
Metabolism; Nucleotide metabolism
Pathway map
rsb00230  Purine metabolism
rsb00230

Module
rsb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rsb00230]
rsb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rsb00230]
rsb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rsb00230]
rsb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rsb00230]
rsb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rsb00230]
rsb_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rsb00230]
rsb_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rsb00230]
Other DBs
GO: 0006163 0042278
Organism
Rhodoferax saidenbachensis [GN:rsb]
Gene
RS694_13875  ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
RS694_04300  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
RS694_05260  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
RS694_09570  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
RS694_15205  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
RS694_18660  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
RS694_09755  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
RS694_13115  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
RS694_19160  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
RS694_19165  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
RS694_19190  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
RS694_19395  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
RS694_16900  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
RS694_20160  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
RS694_04030  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
RS694_15450  ushA; bifunctional metallophosphatase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
RS694_08410  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
RS694_05230  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
RS694_09095  laccase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
RS694_10215  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
RS694_11370  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
RS694_04470  non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
RS694_04880  xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
RS694_04875  xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
RS694_10220  GMP synthetase [KO:K01951] [EC:6.3.5.2]
RS694_06495  guanosine monophosphate reductase [KO:K00364] [EC:1.7.1.7]
RS694_05025  guanine deaminase [KO:K01487] [EC:3.5.4.3]
RS694_04445  guanylate kinase [KO:K00942] [EC:2.7.4.8]
RS694_17040  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
RS694_17045  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
RS694_16320  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
RS694_04435  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
RS694_07330  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
RS694_09475  GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
RS694_19150  hypothetical protein [KO:K01768] [EC:4.6.1.1]
RS694_19480  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
RS694_10245  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
RS694_06915  hypothetical protein [KO:K01768] [EC:4.6.1.1]
RS694_11295  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
RS694_18650  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
RS694_04915  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
RS694_08215  adenylate kinase [KO:K00939] [EC:2.7.4.3]
RS694_05055  bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [KO:K01525] [EC:3.6.1.41]
RS694_10650  sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
RS694_10645  sulfate adenylyltransferase small subunit [KO:K00957] [EC:2.7.7.4]
RS694_04725  5-hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
RS694_15395  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
RS694_01955  hypothetical protein [KO:K16841] [EC:5.1.99.3]
RS694_16540  Asp/Glu racemase [KO:K16841] [EC:5.1.99.3]
RS694_04715  allantoinase [KO:K16842] [EC:3.5.2.5]
RS694_10945  ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
RS694_04540  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
RS694_04545  urease subunit beta [KO:K01429] [EC:3.5.1.5]
RS694_04555  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
RS694_04990  amidase [KO:K22601] [EC:2.1.3.5]
RS694_16600  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
RS694_13720  carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rsb00030  Pentose phosphate pathway
rsb00220  Arginine biosynthesis
rsb00250  Alanine, aspartate and glutamate metabolism
rsb00260  Glycine, serine and threonine metabolism
rsb00340  Histidine metabolism
rsb00630  Glyoxylate and dicarboxylate metabolism
rsb00730  Thiamine metabolism
rsb00740  Riboflavin metabolism
rsb00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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