KEGG   PATHWAY: rus00240
Entry
rus00240                    Pathway                                
Name
Pyrimidine metabolism - Ruminococcus bicirculans (ex Wegman et al. 2014)
Class
Metabolism; Nucleotide metabolism
Pathway map
rus00240  Pyrimidine metabolism
rus00240

Other DBs
GO: 0006220 0006213
Organism
Ruminococcus bicirculans (ex Wegman et al. 2014) [GN:rus]
Gene
RBI_II00015  carB_dapF; carbamoyl phosphate synthase large subunit/diaminopimelate epimerase [KO:K01955] [EC:6.3.5.5]
RBI_II00014  carA; Carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
RBI_II00188  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
RBI_I00682  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
RBI_I00678  pyrD; dihydroorotate dehydrogenase 1B [KO:K17828] [EC:1.3.1.14]
RBI_I00679  pyrK; dihydroorotate dehydrogenase electron transfer subunit [KO:K02823]
RBI_II00141  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
RBI_I00681  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
RBI_II00034  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
RBI_II00247  mazG; MazG family protein [KO:K04765] [EC:3.6.1.9]
RBI_I01666  maf; septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
RBI_II00199  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
RBI_I01041  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
RBI_I00832  conserved hypothetical protein [KO:K00876] [EC:2.7.1.48]
RBI_I01217  udp; Uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
RBI_I00756  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
RBI_I00981  conserved hypothetical protein [KO:K09769] [EC:3.1.4.16]
RBI_I01420  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
RBI_I01720  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
RBI_I01166  unnamed protein product [KO:K08722] [EC:3.1.3.89]
RBI_I01755  dctD; Deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
RBI_I01406  putative thymidylate kinase [KO:K00943] [EC:2.7.4.9]
RBI_I00107  dut; dUTP pyrophosphatase [KO:K01520] [EC:3.6.1.23]
RBI_I01407  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
rus00030  Pentose phosphate pathway
rus00220  Arginine biosynthesis
rus00250  Alanine, aspartate and glutamate metabolism
rus00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   
LinkDB

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