KEGG   PATHWAY: setc00260
Entry
setc00260                   Pathway                                
Name
Glycine, serine and threonine metabolism - Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Description
Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
Class
Metabolism; Amino acid metabolism
Pathway map
setc00260  Glycine, serine and threonine metabolism
setc00260

Module
setc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:setc00260]
setc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:setc00260]
setc_M00621  Glycine cleavage system [PATH:setc00260]
Other DBs
GO: 0006544 0006563 0070178 0006566
Organism
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921 [GN:setc]
Gene
CFSAN001921_19315  aspartate kinase [KO:K00928] [EC:2.7.2.4]
CFSAN001921_17425  thrA; bifunctional aspartokinase I/homoserine dehydrogenase I [KO:K12524] [EC:2.7.2.4 1.1.1.3]
CFSAN001921_19910  metL; bifunctional aspartate kinase II/homoserine dehydrogenase II [KO:K12525] [EC:2.7.2.4 1.1.1.3]
CFSAN001921_22750  aspartate-semialdehyde dehydrogenase [KO:K00133] [EC:1.2.1.11]
CFSAN001921_17420  homoserine kinase [KO:K00872] [EC:2.7.1.39]
CFSAN001921_17415  threonine synthase [KO:K01733] [EC:4.2.3.1]
CFSAN001921_12525  threonine aldolase [KO:K01620] [EC:4.1.2.48]
CFSAN001921_03995  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CFSAN001921_11500  ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
CFSAN001921_22215  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
CFSAN001921_14405  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CFSAN001921_00775  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CFSAN001921_02275  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CFSAN001921_13165  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
CFSAN001921_17500  phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
CFSAN001921_21925  phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
CFSAN001921_01725  3-phosphoglycerate dehydrogenase [KO:K00058] [EC:1.1.1.95 1.1.1.399]
CFSAN001921_12320  3-phosphoserine/phosphohydroxythreonine aminotransferase [KO:K00831] [EC:2.6.1.52]
CFSAN001921_17535  hydrolase [KO:K01079] [EC:3.1.3.3]
CFSAN001921_09570  malonic semialdehyde reductase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
CFSAN001921_21900  2-amino-3-ketobutyrate CoA ligase [KO:K00639] [EC:2.3.1.29]
CFSAN001921_21905  tdh; L-threonine 3-dehydrogenase [KO:K00060] [EC:1.1.1.103]
CFSAN001921_01770  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
CFSAN001921_01760  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
CFSAN001921_16645  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
CFSAN001921_01765  glycine cleavage system protein H [KO:K02437]
CFSAN001921_03780  pssA; phosphatidylserine synthase [KO:K00998] [EC:2.7.8.8]
CFSAN001921_07955  L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
CFSAN001921_00805  L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
CFSAN001921_02215  L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
CFSAN001921_05805  L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
CFSAN001921_00785  threonine dehydratase [KO:K01754] [EC:4.3.1.19]
CFSAN001921_20900  threonine dehydratase [KO:K01754] [EC:4.3.1.19]
CFSAN001921_21425  D-serine dehydratase [KO:K01753] [EC:4.3.1.18]
CFSAN001921_01990  racemase [KO:K25316] [EC:5.1.1.10]
CFSAN001921_08450  tryptophan synthase subunit alpha [KO:K01695] [EC:4.2.1.20]
CFSAN001921_08455  tryptophan synthase subunit beta [KO:K01696] [EC:4.2.1.20]
Compound
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00037  Glycine
C00048  Glyoxylate
C00049  L-Aspartate
C00065  L-Serine
C00078  L-Tryptophan
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00109  2-Oxobutanoate
C00114  Choline
C00143  5,10-Methylenetetrahydrofolate
C00168  Hydroxypyruvate
C00188  L-Threonine
C00197  3-Phospho-D-glycerate
C00213  Sarcosine
C00258  D-Glycerate
C00263  L-Homoserine
C00300  Creatine
C00430  5-Aminolevulinate
C00441  L-Aspartate 4-semialdehyde
C00546  Methylglyoxal
C00576  Betaine aldehyde
C00581  Guanidinoacetate
C00631  2-Phospho-D-glycerate
C00719  Betaine
C00740  D-Serine
C00986  1,3-Diaminopropane
C01005  O-Phospho-L-serine
C01026  N,N-Dimethylglycine
C01102  O-Phospho-L-homoserine
C01242  [Protein]-S8-aminomethyldihydrolipoyllysine
C01888  Aminoacetone
C02051  Lipoylprotein
C02291  L-Cystathionine
C02737  Phosphatidylserine
C02972  Dihydrolipoylprotein
C03082  4-Phospho-L-aspartate
C03194  (R)-1-Aminopropan-2-ol
C03232  3-Phosphonooxypyruvate
C03283  L-2,4-Diaminobutanoate
C03508  L-2-Amino-3-oxobutanoic acid
C05519  L-Allothreonine
C06231  Ectoine
C06442  N(gamma)-Acetyldiaminobutyrate
C16432  5-Hydroxyectoine
C19929  N(alpha)-Acetyl-L-2,4-diaminobutyrate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:11823218
  Authors
Kuhlmann AU, Bremer E.
  Title
Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp.
  Journal
Appl Environ Microbiol 68:772-83 (2002)
DOI:10.1128/AEM.68.2.772-783.2002
Reference
PMID:10473374
  Authors
Canovas D, Borges N, Vargas C, Ventosa A, Nieto JJ, Santos H.
  Title
Role of Ngamma-acetyldiaminobutyrate as an enzyme stabilizer and an intermediate in the biosynthesis of hydroxyectoine.
  Journal
Appl Environ Microbiol 65:3774-9 (1999)
DOI:10.1128/AEM.65.9.3774-3779.1999
Reference
PMID:17636255
  Authors
Bursy J, Pierik AJ, Pica N, Bremer E.
  Title
Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.
  Journal
J Biol Chem 282:31147-55 (2007)
DOI:10.1074/jbc.M704023200
Reference
PMID:16707670
  Authors
Garcia-Estepa R, Argandona M, Reina-Bueno M, Capote N, Iglesias-Guerra F, Nieto JJ, Vargas C.
  Title
The ectD gene, which is involved in the synthesis of the compatible solute hydroxyectoine, is essential for thermoprotection of the halophilic bacterium Chromohalobacter salexigens.
  Journal
J Bacteriol 188:3774-84 (2006)
DOI:10.1128/JB.00136-06
Reference
PMID:15470257
  Authors
Arevalo-Rodriguez M, Pan X, Boeke JD, Heitman J
  Title
FKBP12 controls aspartate pathway flux in Saccharomyces cerevisiae to prevent toxic intermediate accumulation.
  Journal
Eukaryot Cell 3:1287-96 (2004)
DOI:10.1128/EC.3.5.1287-1296.2004
Reference
PMID:7639721
  Authors
Rees WD, Hay SM
  Title
The biosynthesis of threonine by mammalian cells: expression of a complete bacterial biosynthetic pathway in an animal cell.
  Journal
Biochem J 309 ( Pt 3):999-1007 (1995)
DOI:10.1042/bj3090999
Reference
PMID:11341914
  Authors
Jacques SL, Nieman C, Bareich D, Broadhead G, Kinach R, Honek JF, Wright GD
  Title
Characterization of yeast homoserine dehydrogenase, an antifungal target: the invariant histidine 309 is important for enzyme integrity.
  Journal
Biochim Biophys Acta 1544:28-41 (2001)
DOI:10.1016/S0167-4838(00)00203-X
Reference
PMID:15520012
  Authors
Chen X, Jhee KH, Kruger WD
  Title
Production of the neuromodulator H2S by cystathionine beta-synthase via the condensation of cysteine and homocysteine.
  Journal
J Biol Chem 279:52082-6 (2004)
DOI:10.1074/jbc.C400481200
Related
pathway
setc00010  Glycolysis / Gluconeogenesis
setc00020  Citrate cycle (TCA cycle)
setc00230  Purine metabolism
setc00250  Alanine, aspartate and glutamate metabolism
setc00270  Cysteine and methionine metabolism
setc00290  Valine, leucine and isoleucine biosynthesis
setc00300  Lysine biosynthesis
setc00330  Arginine and proline metabolism
setc00460  Cyanoamino acid metabolism
setc00470  D-Amino acid metabolism
setc00564  Glycerophospholipid metabolism
setc00600  Sphingolipid metabolism
setc00620  Pyruvate metabolism
setc00630  Glyoxylate and dicarboxylate metabolism
setc00640  Propanoate metabolism
setc00680  Methane metabolism
setc00860  Porphyrin metabolism
setc00920  Sulfur metabolism
KO pathway
ko00260   
LinkDB

DBGET integrated database retrieval system