KEGG   PATHWAY: taw00630
Entry
taw00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Tabrizicola piscis
Class
Metabolism; Carbohydrate metabolism
Pathway map
taw00630  Glyoxylate and dicarboxylate metabolism
taw00630

Module
taw_M00373  Ethylmalonyl pathway [PATH:taw00630]
taw_M00621  Glycine cleavage system [PATH:taw00630]
taw_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:taw00630]
Other DBs
GO: 0046487 0043648
Organism
Tabrizicola piscis [GN:taw]
Gene
EI545_07555  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
EI545_18320  malate synthase G [KO:K01638] [EC:2.3.3.9]
EI545_06990  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
EI545_18425  citrate synthase [KO:K01647] [EC:2.3.3.1]
EI545_18100  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
EI545_00090  sucD; succinate--CoA ligase subunit alpha [KO:K08692] [EC:6.2.1.9]
EI545_00085  malate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
EI545_06500  thiolase family protein [KO:K00626] [EC:2.3.1.9]
EI545_10325  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
EI545_13890  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
EI545_02950  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
EI545_10330  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
EI545_13325  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
EI545_06880  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
EI545_15255  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
EI545_06890  protein meaA [KO:K14447] [EC:5.4.99.63]
EI545_08280  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
EI545_06960  MaoC family dehydratase [KO:K14449] [EC:4.2.1.148]
EI545_00080  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
EI545_09215  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
EI545_06975  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
EI545_06395  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
EI545_06415  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
EI545_06385  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
EI545_14380  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
EI545_14385  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
EI545_04180  catalase [KO:K03781] [EC:1.11.1.6]
EI545_07450  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
EI545_07400  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
EI545_00160  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
EI545_16245  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
EI545_03580  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
EI545_14940  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
EI545_00075  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
EI545_19035  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
EI545_07410  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
EI545_14665  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
EI545_17225  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
EI545_17235  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
EI545_18170  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
EI545_08515  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
EI545_06910  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K00600] [EC:2.1.2.1]
EI545_07175  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
EI545_07280  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
EI545_08455  DUF1989 domain-containing protein [KO:K00605] [EC:2.1.2.10]
EI545_08485  aminomethyl transferase family protein [KO:K00605] [EC:2.1.2.10]
EI545_16120  aminomethyl transferase family protein [KO:K00605] [EC:2.1.2.10]
EI545_07290  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
EI545_19910  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EI545_07055  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EI545_07285  gcvH; glycine cleavage system protein GcvH [KO:K02437]
EI545_17545  glycerate kinase [KO:K11529] [EC:2.7.1.165]
EI545_01005  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
EI545_09440  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
EI545_09450  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
EI545_09455  formate dehydrogenase [KO:K00124]
EI545_09460  formate dehydrogenase subunit gamma [KO:K00127]
EI545_03725  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
EI545_04505  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
EI545_12485  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
taw00010  Glycolysis / Gluconeogenesis
taw00020  Citrate cycle (TCA cycle)
taw00030  Pentose phosphate pathway
taw00053  Ascorbate and aldarate metabolism
taw00071  Fatty acid degradation
taw00230  Purine metabolism
taw00250  Alanine, aspartate and glutamate metabolism
taw00260  Glycine, serine and threonine metabolism
taw00620  Pyruvate metabolism
taw00710  Carbon fixation by Calvin cycle
taw00750  Vitamin B6 metabolism
taw00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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