PATHWAY: yal00240 Help Entry yal00240                    Pathway                                 Name Pyrimidine metabolism - Yersinia aldovae Class Metabolism; Nucleotide metabolism BRITE hierarchy Pathway map yal00240   Pyrimidine metabolism Ortholog table Module yal_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:yal00240] yal_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yal00240] yal_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yal00240] yal_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yal00240] Other DBs GO:  0006220 0006213 Organism Yersinia aldovae [GN:yal] Gene AT01_3137   carB; carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5] AT01_3136   carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5] AT01_2050   pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2] AT01_2051   pyrI; aspartate carbamoyltransferase, regulatory subunit [KO:K00610] AT01_896   pyrC; dihydroorotase, homodimeric type [KO:K01465] [EC:3.5.2.3] AT01_2062   amidohydrolase family protein [KO:K01465] [EC:3.5.2.3] AT01_946   pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2] AT01_2421   pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10] AT01_478   pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23] AT01_1595   pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22] AT01_3541   ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6] AT01_3273   MazG family protein [KO:K04765] [EC:3.6.1.9] AT01_2083   maf; septum formation protein Maf [KO:K06287] [EC:3.6.1.-] AT01_1980   hypothetical protein [KO:K07043] [EC:3.6.1.-] AT01_3274   pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2] AT01_973   cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25] AT01_535   nudG; CTP pyrophosphohydrolase [KO:K08320] [EC:3.6.1.65] AT01_3966   udk; uridine kinase [KO:K00876] [EC:2.7.1.48] AT01_1394   ushA; protein UshA [KO:K11751] [EC:3.1.3.5 3.6.1.45] AT01_3298   surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] AT01_3763   HAD hydrolase, IA, variant 1 family protein [KO:K02566] [EC:3.1.3.5] AT01_400   noncanonical pyrimidine nucleotidase, YjjG family [KO:K08723] [EC:3.1.3.-] AT01_2219   udp; uridine phosphorylase [KO:K00757] [EC:2.4.2.3] AT01_1502   hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2] AT01_3596   upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9] AT01_3807   hypothetical protein [KO:K01119] [EC:3.1.4.16 3.1.3.6] AT01_2933   cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6] AT01_1611   hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-] AT01_3957   cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5] AT01_2711   codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21] AT01_3000   nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6] AT01_3967   dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13] AT01_3416   ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1] AT01_1146   ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1] AT01_1147   nrdB; ribonucleoside-diphosphate reductase 1 subunit beta [KO:K00526] [EC:1.17.4.1] AT01_3415   ribonucleotide reductase, small chain family protein [KO:K00526] [EC:1.17.4.1] AT01_1187   HD domain protein [KO:K08722] [EC:3.1.3.89] AT01_152   hypothetical protein [KO:K06952] [EC:3.1.3.89] AT01_881   tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9] AT01_2419   dut; dUTP diphosphatase family protein [KO:K01520] [EC:3.6.1.23] AT01_3093   deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4] AT01_523   thymidine kinase family protein [KO:K00857] [EC:2.7.1.21] AT01_1641   thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45] AT01_425   ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG [KO:K16066] [EC:1.1.1.381 1.1.1.-] Compound C00015   UDP C00039   DNA C00046   RNA C00055   CMP C00063   CTP C00064   L-Glutamine C00075   UTP C00086   Urea C00099   beta-Alanine C00105   UMP C00106   Uracil C00112   CDP C00119   5-Phospho-alpha-D-ribose 1-diphosphate C00169   Carbamoyl phosphate C00178   Thymine C00214   Thymidine C00222   3-Oxopropanoate C00239   dCMP C00295   Orotate C00299   Uridine C00337   (S)-Dihydroorotate C00363   dTDP C00364   dTMP C00365   dUMP C00380   Cytosine C00383   Malonate C00429   5,6-Dihydrouracil C00438   N-Carbamoyl-L-aspartate C00458   dCTP C00459   dTTP C00460   dUTP C00475   Cytidine C00526   Deoxyuridine C00672   2-Deoxy-D-ribose 1-phosphate C00705   dCDP C00813   Barbiturate C00881   Deoxycytidine C00941   3',5'-Cyclic CMP C01013   3-Hydroxypropanoate C01103   Orotidine 5'-phosphate C01168   Pseudouridine 5'-phosphate C01205   (R)-3-Amino-2-methylpropanoate C01346   dUDP C01368   3'-UMP C01563   Carbamate C02067   Pseudouridine C02170   Methylmalonate C02354   2',3'-Cyclic CMP C02355   2',3'-Cyclic UMP C02376   5-Methylcytosine C02642   3-Ureidopropionate C03997   5-Hydroxymethyldeoxycytidylate C05281   5-Methylbarbiturate C05822   3'-CMP C06198   P1,P4-Bis(5'-uridyl) tetraphosphate C11038   2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate C11039   2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate C15607   3-Oxo-3-ureidopropanoate C20231   (Z)-3-Ureidoacrylate peracid C20249   (Z)-3-Peroxyaminoacrylate C20253   Aminoacrylate C20254   Ureidoacrylate C20846   3-Oxo-3-ureidoisobutyrate C21028   (R)-5,6-Dihydrothymine C21029   (R)-3-Ureidoisobutyrate C22509   3',5'-Cyclic UMP Related pathway yal00030   Pentose phosphate pathway yal00220   Arginine biosynthesis yal00250   Alanine, aspartate and glutamate metabolism yal00280   Valine, leucine and isoleucine degradation yal00410   beta-Alanine metabolism KO pathway ko00240     LinkDB All DBs

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