KEGG   PATHWAY: phi00970
Entry
phi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pseudopodoces humilis (Tibetan ground-tit)
Class
Genetic Information Processing; Translation
Pathway map
phi00970  Aminoacyl-tRNA biosynthesis
phi00970

Organism
Pseudopodoces humilis (Tibetan ground-tit) [GN:phi]
Gene
102099682  DARS; aspartate--tRNA ligase, cytoplasmic [KO:K22503] [EC:6.1.1.12]
102100039  NARS2; probable asparagine--tRNA ligase, mitochondrial [KO:K01893] [EC:6.1.1.22]
102100686  YARS; tyrosine--tRNA ligase, cytoplasmic [KO:K01866] [EC:6.1.1.1]
102100740  PSTK; L-seryl-tRNA(Sec) kinase [KO:K10837] [EC:2.7.1.164]
102100872  TARS; threonine--tRNA ligase, cytoplasmic [KO:K01868] [EC:6.1.1.3]
102101130  SARS2; serine--tRNA ligase, mitochondrial [KO:K01875] [EC:6.1.1.11]
102101554  AARS2; alanine--tRNA ligase, mitochondrial [KO:K01872] [EC:6.1.1.7]
102101897  WARS2; tryptophan--tRNA ligase, mitochondrial [KO:K01867] [EC:6.1.1.2]
102102548  GATB; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
102103323  FARSB; phenylalanine--tRNA ligase beta subunit isoform X1 [KO:K01890] [EC:6.1.1.20]
102103591  RARS2; probable arginine--tRNA ligase, mitochondrial [KO:K01887] [EC:6.1.1.19]
102104270  QARS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
102105395  MARS; methionine--tRNA ligase, cytoplasmic [KO:K01874] [EC:6.1.1.10]
102105433  [KO:K01892] [EC:6.1.1.21]
102106050  LARS; leucine--tRNA ligase, cytoplasmic [KO:K01869] [EC:6.1.1.4]
102106250  MARS2; methionine--tRNA ligase, mitochondrial [KO:K01874] [EC:6.1.1.10]
102106335  IARS; isoleucine--tRNA ligase, cytoplasmic isoform X2 [KO:K01870] [EC:6.1.1.5]
102106393  SARS; serine--tRNA ligase, cytoplasmic [KO:K01875] [EC:6.1.1.11]
102106465  TARS2; threonine--tRNA ligase, mitochondrial [KO:K01868] [EC:6.1.1.3]
102107602  [KO:K01892] [EC:6.1.1.21]
102107635  KARS; lysine--tRNA ligase isoform X2 [KO:K04567] [EC:6.1.1.6]
102107892  MTFMT; methionyl-tRNA formyltransferase, mitochondrial [KO:K00604] [EC:2.1.2.9]
102108369  FARSA; phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
102108435  LARS2; probable leucine--tRNA ligase, mitochondrial [KO:K01869] [EC:6.1.1.4]
102108868  [KO:K01868] [EC:6.1.1.3]
102108872  CARS; cysteine--tRNA ligase, cytoplasmic isoform X2 [KO:K01883] [EC:6.1.1.16]
102109213  [KO:K01873] [EC:6.1.1.9]
102109314  DARS2; aspartate--tRNA ligase, mitochondrial [KO:K01876] [EC:6.1.1.12]
102109474  RARS; arginine--tRNA ligase, cytoplasmic isoform X2 [KO:K01887] [EC:6.1.1.19]
102109789  YARS2; tyrosine--tRNA ligase, mitochondrial [KO:K01866] [EC:6.1.1.1]
102109963  GATC; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
102109974  GARS; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
102110027  FARS2; phenylalanine--tRNA ligase, mitochondrial [KO:K01889] [EC:6.1.1.20]
102110588  AARS; alanine--tRNA ligase, cytoplasmic isoform X1 [KO:K01872] [EC:6.1.1.7]
102111498  CARS2; probable cysteine--tRNA ligase, mitochondrial [KO:K01883] [EC:6.1.1.16]
102111984  SEPSECS; O-phosphoseryl-tRNA(Sec) selenium transferase isoform X1 [KO:K03341] [EC:2.9.1.2]
102112146  NARS; asparagine--tRNA ligase, cytoplasmic [KO:K01893] [EC:6.1.1.22]
102113118  EARS2; probable glutamate--tRNA ligase, mitochondrial [KO:K01885] [EC:6.1.1.17]
102113420  QRSL1; glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
102113669  WARS; tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
102113745  IARS2; isoleucine--tRNA ligase, mitochondrial [KO:K01870] [EC:6.1.1.5]
102114048  PARS2; probable proline--tRNA ligase, mitochondrial [KO:K01881] [EC:6.1.1.15]
102114115  EPRS; bifunctional glutamate/proline--tRNA ligase isoform X2 [KO:K14163] [EC:6.1.1.17 6.1.1.15]
102114761  VARS2; valine--tRNA ligase, mitochondrial [KO:K01873] [EC:6.1.1.9]
64988639  KEH15_t04; tRNA-Ile [KO:K14227]
64988640  KEH15_t07; tRNA-Trp [KO:K14235]
64988641  KEH15_t12; tRNA-Ser [KO:K14233]
64988642  KEH15_t14; tRNA-Lys [KO:K14229]
64988643  KEH15_t15; tRNA-Gly [KO:K14225]
64988644  KEH15_t16; tRNA-Arg [KO:K14219]
64988645  KEH15_t17; tRNA-His [KO:K14226]
64988646  KEH15_t20; tRNA-Thr [KO:K14234]
64988647  KEH15_t22; tRNA-Glu [KO:K14224]
64988649  KEH15_t02; tRNA-Val [KO:K14237]
64988651  KEH15_t03; tRNA-Leu [KO:K14228]
64988652  KEH15_t05; tRNA-Gln [KO:K14223]
64988653  KEH15_t06; tRNA-Met [KO:K14230]
64988654  KEH15_t08; tRNA-Ala [KO:K14218]
64988655  KEH15_t09; tRNA-Asn [KO:K14220]
64988656  KEH15_t10; tRNA-Cys [KO:K14222]
64988657  KEH15_t11; tRNA-Tyr [KO:K14236]
64988658  KEH15_t13; tRNA-Asp [KO:K14221]
64988659  KEH15_t18; tRNA-Ser [KO:K14233]
64988660  KEH15_t19; tRNA-Leu [KO:K14228]
64988661  KEH15_t21; tRNA-Pro [KO:K14232]
64988662  KEH15_t01; tRNA-Phe [KO:K14231]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
phi00250  Alanine, aspartate and glutamate metabolism
phi00260  Glycine, serine and threonine metabolism
phi00270  Cysteine and methionine metabolism
phi00290  Valine, leucine and isoleucine biosynthesis
phi00330  Arginine and proline metabolism
phi00340  Histidine metabolism
phi00380  Tryptophan metabolism
phi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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