KEGG   PATHWAY: psdt00230
Entry
psdt00230                   Pathway                                
Name
Purine metabolism - Pseudomonas sp. Stari2
Class
Metabolism; Nucleotide metabolism
Pathway map
psdt00230  Purine metabolism
psdt00230

Module
psdt_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:psdt00230]
psdt_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psdt00230]
psdt_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psdt00230]
psdt_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psdt00230]
psdt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psdt00230]
psdt_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:psdt00230]
psdt_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:psdt00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudomonas sp. Stari2 [GN:psdt]
Gene
NH234_00010  [KO:K03816] [EC:2.4.2.22]
NH234_00180  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
NH234_00190  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
NH234_00535  [KO:K01589] [EC:6.3.4.18]
NH234_00540  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
NH234_02330  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
NH234_02335  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
NH234_03330  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
NH234_03390  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
NH234_03400  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
NH234_03550  [KO:K01939] [EC:6.3.4.4]
NH234_03820  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
NH234_03825  [KO:K01429] [EC:3.5.1.5]
NH234_03840  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
NH234_03980  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
NH234_03985  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
NH234_04275  [KO:K21053] [EC:3.5.4.2]
NH234_05425  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
NH234_05430  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
NH234_06025  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
NH234_06090  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
NH234_06370  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
NH234_06660  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
NH234_08165  [KO:K01923] [EC:6.3.2.6]
NH234_09475  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
NH234_09480  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
NH234_09840  [KO:K01483] [EC:4.3.2.3]
NH234_09845  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
NH234_09850  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
NH234_09855  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
NH234_09860  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
NH234_10055  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
NH234_10115  [KO:K16841] [EC:5.1.99.3]
NH234_10325  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
NH234_10335  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
NH234_10340  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
NH234_10410  [KO:K00759] [EC:2.4.2.7]
NH234_10860  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
NH234_12260  [KO:K11177] [EC:1.17.1.4]
NH234_12265  [KO:K11178] [EC:1.17.1.4]
NH234_12270  paoA; aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
NH234_15420  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
NH234_15590  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
NH234_17895  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
NH234_19110  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
NH234_20990  [KO:K09913] [EC:2.4.2.1 2.4.2.2]
NH234_21095  [KO:K01129] [EC:3.1.5.1]
NH234_21255  [KO:K01081] [EC:3.1.3.5]
NH234_21565  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
NH234_22330  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
NH234_22335  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
NH234_22470  [KO:K00525] [EC:1.17.4.1]
NH234_22705  [KO:K00526] [EC:1.17.4.1]
NH234_23175  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
NH234_24200  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
NH234_24205  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
NH234_24290  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
NH234_24910  [KO:K00760] [EC:2.4.2.8]
NH234_25045  [KO:K00948] [EC:2.7.6.1]
NH234_25540  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
NH234_26070  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
NH234_27110  [KO:K01525] [EC:3.6.1.41]
NH234_28035  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
NH234_28720  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
NH234_28870  [KO:K05851] [EC:4.6.1.1]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
psdt00030  Pentose phosphate pathway
psdt00220  Arginine biosynthesis
psdt00250  Alanine, aspartate and glutamate metabolism
psdt00260  Glycine, serine and threonine metabolism
psdt00340  Histidine metabolism
psdt00630  Glyoxylate and dicarboxylate metabolism
psdt00730  Thiamine metabolism
psdt00740  Riboflavin metabolism
psdt00790  Folate biosynthesis
KO pathway
ko00230   

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