KEGG   PATHWAY: ptre00230
Entry
ptre00230                   Pathway                                
Name
Purine metabolism - Pseudomonas tremae
Class
Metabolism; Nucleotide metabolism
Pathway map
ptre00230  Purine metabolism
ptre00230

Module
ptre_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:ptre00230]
ptre_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ptre00230]
ptre_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ptre00230]
ptre_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ptre00230]
ptre_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ptre00230]
ptre_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ptre00230]
ptre_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ptre00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudomonas tremae [GN:ptre]
Gene
I9H09_00010  [KO:K03816] [EC:2.4.2.22]
I9H09_00145  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
I9H09_00185  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
I9H09_00195  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
I9H09_00615  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
I9H09_00620  [KO:K01589] [EC:6.3.4.18]
I9H09_01150  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
I9H09_01155  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
I9H09_01945  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
I9H09_02100  [KO:K01525] [EC:3.6.1.41]
I9H09_02665  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
I9H09_03645  [KO:K16856] [EC:4.3.2.3]
I9H09_04015  [KO:K21053] [EC:3.5.4.2]
I9H09_04515  [KO:K00948] [EC:2.7.6.1]
I9H09_04650  [KO:K00760] [EC:2.4.2.8]
I9H09_05990  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
I9H09_06075  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
I9H09_06080  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
I9H09_06235  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
I9H09_06275  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
I9H09_06475  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
I9H09_06735  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
I9H09_07320  [KO:K00526] [EC:1.17.4.1]
I9H09_07330  [KO:K00525] [EC:1.17.4.1]
I9H09_07450  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
I9H09_07455  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
I9H09_07475  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
I9H09_07480  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
I9H09_08270  [KO:K16841] [EC:5.1.99.3]
I9H09_08440  [KO:K06966] [EC:3.2.2.10 3.2.2.-]
I9H09_08800  [KO:K00759] [EC:2.4.2.7]
I9H09_08940  [KO:K09913] [EC:2.4.2.1 2.4.2.2]
I9H09_09610  [KO:K01483] [EC:4.3.2.3]
I9H09_09615  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
I9H09_09620  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
I9H09_09625  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
I9H09_09630  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
I9H09_09640  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
I9H09_09650  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
I9H09_09655  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
I9H09_10770  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
I9H09_11990  [KO:K01835] [EC:5.4.2.2]
I9H09_12915  [KO:K03651] [EC:3.1.4.53]
I9H09_13590  [KO:K11177] [EC:1.17.1.4]
I9H09_13595  [KO:K11178] [EC:1.17.1.4]
I9H09_13600  [KO:K13483]
I9H09_14920  [KO:K01129] [EC:3.1.5.1]
I9H09_15270  [KO:K01081] [EC:3.1.3.5]
I9H09_16545  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
I9H09_17195  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
I9H09_19420  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
I9H09_19425  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
I9H09_20405  [KO:K11177] [EC:1.17.1.4]
I9H09_20410  [KO:K11178] [EC:1.17.1.4]
I9H09_20415  [KO:K13483]
I9H09_20590  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
I9H09_20940  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
I9H09_20945  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
I9H09_21065  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
I9H09_21080  [KO:K01429] [EC:3.5.1.5]
I9H09_21085  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
I9H09_21335  [KO:K01939] [EC:6.3.4.4]
I9H09_21475  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
I9H09_21505  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
I9H09_21875  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
I9H09_22935  [KO:K03651] [EC:3.1.4.53]
I9H09_23735  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
I9H09_24985  [KO:K05851] [EC:4.6.1.1]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ptre00030  Pentose phosphate pathway
ptre00220  Arginine biosynthesis
ptre00250  Alanine, aspartate and glutamate metabolism
ptre00260  Glycine, serine and threonine metabolism
ptre00340  Histidine metabolism
ptre00630  Glyoxylate and dicarboxylate metabolism
ptre00730  Thiamine metabolism
ptre00740  Riboflavin metabolism
ptre00790  Folate biosynthesis
KO pathway
ko00230   

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