KEGG   PATHWAY: rhey00230
Entry
rhey00230                   Pathway                                
Name
Purine metabolism - Rodentibacter caecimuris
Class
Metabolism; Nucleotide metabolism
Pathway map
rhey00230  Purine metabolism
rhey00230

Module
rhey_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:rhey00230]
rhey_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rhey00230]
rhey_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rhey00230]
rhey_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rhey00230]
rhey_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rhey00230]
Other DBs
GO: 0006163 0042278
Organism
Rodentibacter caecimuris [GN:rhey]
Gene
FEE42_00075  [KO:K00759] [EC:2.4.2.7]
FEE42_00295  [KO:K08722] [EC:3.1.3.89]
FEE42_00460  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
FEE42_00885  [KO:K00948] [EC:2.7.6.1]
FEE42_02035  [KO:K01129] [EC:3.1.5.1]
FEE42_02400  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
FEE42_02570  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
FEE42_02575  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
FEE42_02590  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
FEE42_02595  ureB; urease subunit beta [KO:K01429] [EC:3.5.1.5]
FEE42_02600  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
FEE42_03190  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
FEE42_03195  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
FEE42_03265  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
FEE42_03410  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
FEE42_03515  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
FEE42_03530  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
FEE42_04790  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
FEE42_04795  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
FEE42_05420  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
FEE42_05430  [KO:K00942] [EC:2.7.4.8]
FEE42_06250  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
FEE42_06685  [KO:K05851] [EC:4.6.1.1]
FEE42_06920  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
FEE42_07130  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
FEE42_07465  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
FEE42_07650  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
FEE42_07710  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
FEE42_07820  [KO:K00769] [EC:2.4.2.22]
FEE42_08010  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
FEE42_08040  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
FEE42_08410  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
FEE42_09115  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
FEE42_09335  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
FEE42_09700  [KO:K01519] [EC:3.6.1.66]
FEE42_10575  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
FEE42_10585  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
FEE42_10690  apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [KO:K01525] [EC:3.6.1.41]
FEE42_10885  [KO:K00939] [EC:2.7.4.3]
FEE42_11210  [KO:K00940] [EC:2.7.4.6]
FEE42_11270  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
FEE42_11385  [KO:K01923] [EC:6.3.2.6]
FEE42_11595  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
FEE42_11635  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
FEE42_11640  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
FEE42_11770  [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rhey00030  Pentose phosphate pathway
rhey00220  Arginine biosynthesis
rhey00250  Alanine, aspartate and glutamate metabolism
rhey00260  Glycine, serine and threonine metabolism
rhey00340  Histidine metabolism
rhey00630  Glyoxylate and dicarboxylate metabolism
rhey00730  Thiamine metabolism
rhey00740  Riboflavin metabolism
rhey00790  Folate biosynthesis
KO pathway
ko00230   

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