KEGG   PATHWAY: sho00630
Entry
sho00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces hygroscopicus subsp. jinggangensis TL01
Class
Metabolism; Carbohydrate metabolism
Pathway map
sho00630  Glyoxylate and dicarboxylate metabolism
sho00630

Module
sho_M00621  Glycine cleavage system [PATH:sho00630]
sho_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sho00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces hygroscopicus subsp. jinggangensis TL01 [GN:sho]
Gene
SHJGH_2203  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SHJGH_5211  putative acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SHJGH_7017  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SHJGH_7051  malate synthase [KO:K01638] [EC:2.3.3.9]
SHJGH_5712  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
SHJGH_6697  citrate synthase [KO:K01647] [EC:2.3.3.1]
SHJGH_6698  citrate synthase [KO:K01647] [EC:2.3.3.1]
SHJGH_4518  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
SHJGH_4003  type II citrate synthase [KO:K01647] [EC:2.3.3.1]
SHJGH_6830  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
SHJGH_3263  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SHJGH_3594  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SHJGH_4314  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SHJGH_6239  thiolase FadA [KO:K00626] [EC:2.3.1.9]
SHJGH_7386  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SHJGH_6238  hypothetical protein [KO:K05606] [EC:5.1.99.1]
SHJGH_7193  coenzyme B12-dependent mutase [KO:K14447] [EC:5.4.99.63]
SHJGH_5797  acyl-CoA carboxylase complex A subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
SHJGH_5802  propionyl-CoA carboxylase complex B subunit [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
SHJGH_5801  hypothetical protein [KO:K27095]
SHJGH_6769  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
SHJGH_6770  methylmalonyl-CoA mutase, beta subunit [KO:K01847] [EC:5.4.99.2]
SHJGH_5754  methylmalonyll-CoA mutase [KO:K01848] [EC:5.4.99.2]
SHJGH_1674  glutamate mutase E-chain [KO:K19268] [EC:5.4.99.1]
SHJGH_1428  glutamate mutase E-chain [KO:K19268] [EC:5.4.99.1]
SHJGH_1427  glutamate mutase S-chain [KO:K01846] [EC:5.4.99.1]
SHJGH_1675  glutamate mutase S-chain [KO:K01846] [EC:5.4.99.1]
SHJGH_4166  (S)-2-hydroxy-acid oxidase [KO:K00104] [EC:1.1.99.14]
SHJGH_0273  catalase [KO:K03781] [EC:1.11.1.6]
SHJGH_6077  bromoperoxidase-catalase [KO:K03781] [EC:1.11.1.6]
SHJGH_7024  catalase [KO:K03781] [EC:1.11.1.6]
SHJGH_8009  catalase [KO:K03781] [EC:1.11.1.6]
SHJGH_7746  putative catalase [KO:K03781] [EC:1.11.1.6]
SHJGH_0410  hydrolase [KO:K01091] [EC:3.1.3.18]
SHJGH_4565  hydrolase [KO:K01091] [EC:3.1.3.18]
SHJGH_1554  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SHJGH_2814  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SHJGH_3452  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SHJGH_3467  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SHJGH_3495  putative glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SHJGH_7447  putative glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SHJGH_1608  putative glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SHJGH_5728  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SHJGH_6206  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SHJGH_6319  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SHJGH_2560  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
SHJGH_6321  glycine cleavage system aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
SHJGH_0613  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SHJGH_2227  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SHJGH_3424  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SHJGH_6917  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SHJGH_6320  glycine cleavage system H protein [KO:K02437]
SHJGH_7020  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
SHJGH_7026  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
SHJGH_8245  xylose isomerase domain protein TIM barrel [KO:K01816] [EC:5.3.1.22]
SHJGH_7025  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
SHJGH_7187  glycerate kinase [KO:K00865] [EC:2.7.1.165]
SHJGH_3553  2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SHJGH_8192  aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SHJGH_6150  alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
SHJGH_1779  molybdopterin oxidoreductase Fe4S4 region [KO:K00123] [EC:1.17.1.9]
SHJGH_1780  formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
SHJGH_1775  4Fe-4S ferredoxin, iron-sulfur binding protein [KO:K00124]
SHJGH_2891  hypothetical protein [KO:K00127]
SHJGH_0189  putative formate dehydrogenase [KO:K00127]
SHJGH_4504  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
SHJGH_1488  formamidase [KO:K01455] [EC:3.5.1.49]
SHJGH_0900  acyl-CoA synthetase [KO:K22133] [EC:6.2.1.8]
SHJGH_0899  putative oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
SHJGH_7286  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
SHJGH_0898  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sho00010  Glycolysis / Gluconeogenesis
sho00020  Citrate cycle (TCA cycle)
sho00030  Pentose phosphate pathway
sho00053  Ascorbate and aldarate metabolism
sho00071  Fatty acid degradation
sho00230  Purine metabolism
sho00250  Alanine, aspartate and glutamate metabolism
sho00260  Glycine, serine and threonine metabolism
sho00620  Pyruvate metabolism
sho00710  Carbon fixation by Calvin cycle
sho00750  Vitamin B6 metabolism
sho00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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