KEGG   PATHWAY: snem00330
Entry
snem00330                   Pathway                                
Name
Arginine and proline metabolism - Serratia nematodiphila
Class
Metabolism; Amino acid metabolism
Pathway map
snem00330  Arginine and proline metabolism
snem00330

Module
snem_M00015  Proline biosynthesis, glutamate => proline [PATH:snem00330]
snem_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:snem00330]
snem_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:snem00330]
snem_M00970  Proline degradation, proline => glutamate [PATH:snem00330]
Other DBs
GO: 0006525 0006560
Organism
Serratia nematodiphila [GN:snem]
Gene
NLX84_23340  cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
NLX84_20730  speA; biosynthetic arginine decarboxylase [KO:K01585] [EC:4.1.1.19]
NLX84_20725  speB; agmatinase [KO:K01480] [EC:3.5.3.11]
NLX84_12565  agmatine deiminase family protein [KO:K10536] [EC:3.5.3.12]
NLX84_05200  nitrilase family protein [KO:K12251] [EC:3.5.1.53]
NLX84_21060  speF; ornithine decarboxylase SpeF [KO:K01581] [EC:4.1.1.17]
NLX84_02060  speF; ornithine decarboxylase SpeF [KO:K01581] [EC:4.1.1.17]
NLX84_20875  speD; adenosylmethionine decarboxylase [KO:K01611] [EC:4.1.1.50]
NLX84_18775  NAD(P)/FAD-dependent oxidoreductase [KO:K00316] [EC:1.5.99.6]
NLX84_18780  patD; aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
NLX84_18805  gamma-aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
NLX84_18300  speG; spermidine N1-acetyltransferase [KO:K00657] [EC:2.3.1.57]
NLX84_08050  speB; agmatinase [KO:K12255] [EC:3.5.3.7]
NLX84_14420  astA; arginine N-succinyltransferase [KO:K00673] [EC:2.3.1.109]
NLX84_14410  astB; N-succinylarginine dihydrolase [KO:K01484] [EC:3.5.3.23]
NLX84_14425  aspartate aminotransferase family protein [KO:K00840] [EC:2.6.1.81]
NLX84_14415  astD; succinylglutamate-semialdehyde dehydrogenase [KO:K06447] [EC:1.2.1.71]
NLX84_14405  astE; succinylglutamate desuccinylase [KO:K05526] [EC:3.5.1.96]
NLX84_16530  glutamine synthetase family protein [KO:K09470] [EC:6.3.1.11]
NLX84_02545  glutamine synthetase family protein [KO:K09470] [EC:6.3.1.11]
NLX84_10520  glutamine synthetase family protein [KO:K09470] [EC:6.3.1.11]
NLX84_02715  FAD-binding oxidoreductase [KO:K09471] [EC:1.4.3.-]
NLX84_10500  FAD-binding oxidoreductase [KO:K09471] [EC:1.4.3.-]
NLX84_10505  puuC; aldehyde dehydrogenase PuuC [KO:K09472] [EC:1.2.1.99]
NLX84_10515  puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [KO:K09473] [EC:3.5.1.94]
NLX84_20995  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
NLX84_14725  putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase [KO:K13821] [EC:1.5.5.2 1.2.1.88]
NLX84_04310  proB; glutamate 5-kinase [KO:K00931] [EC:2.7.2.11]
NLX84_04315  proA; glutamate-5-semialdehyde dehydrogenase [KO:K00147] [EC:1.2.1.41]
NLX84_09605  pip; prolyl aminopeptidase [KO:K01259] [EC:3.4.11.5]
NLX84_08615  aspartate/tyrosine/aromatic aminotransferase [KO:K00813] [EC:2.6.1.1]
Compound
C00012  Peptide
C00019  S-Adenosyl-L-methionine
C00022  Pyruvate
C00025  L-Glutamate
C00048  Glyoxylate
C00062  L-Arginine
C00077  L-Ornithine
C00086  Urea
C00134  Putrescine
C00148  L-Proline
C00179  Agmatine
C00213  Sarcosine
C00223  p-Coumaroyl-CoA
C00300  Creatine
C00315  Spermidine
C00334  4-Aminobutanoate
C00406  Feruloyl-CoA
C00431  5-Aminopentanoate
C00436  N-Carbamoylputrescine
C00441  L-Aspartate 4-semialdehyde
C00533  Nitric oxide
C00555  4-Aminobutyraldehyde
C00581  Guanidinoacetate
C00750  Spermine
C00763  D-Proline
C00791  Creatinine
C00884  Homocarnosine
C00986  1,3-Diaminopropane
C01035  4-Guanidinobutanoate
C01043  N-Carbamoylsarcosine
C01110  5-Amino-2-oxopentanoic acid
C01137  S-Adenosylmethioninamine
C01157  Hydroxyproline
C01165  L-Glutamate 5-semialdehyde
C01250  N-Acetyl-L-glutamate 5-semialdehyde
C01682  Nopaline
C02305  Phosphocreatine
C02565  N-Methylhydantoin
C02647  4-Guanidinobutanal
C02714  N-Acetylputrescine
C02946  4-Acetamidobutanoate
C03078  4-Guanidinobutanamide
C03166  Phosphoguanidinoacetate
C03287  L-Glutamyl 5-phosphate
C03296  N2-Succinyl-L-arginine
C03375  Norspermidine
C03415  N2-Succinyl-L-ornithine
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03912  (S)-1-Pyrroline-5-carboxylate
C04137  Octopine
C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
C05147  trans-3-Hydroxy-L-proline
C05931  N-Succinyl-L-glutamate
C05932  N-Succinyl-L-glutamate 5-semialdehyde
C05933  N(omega)-Hydroxyarginine
C05936  N4-Acetylaminobutanal
C05938  L-4-Hydroxyglutamate semialdehyde
C05945  L-Arginine phosphate
C05946  (4R)-4-Hydroxy-2-oxoglutarate
C05947  L-erythro-4-Hydroxyglutamate
C10497  Feruloylputrescine
C15699  gamma-L-Glutamylputrescine
C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
C15767  4-(L-gamma-Glutamylamino)butanoate
C18172  Carboxyspermidine
C18174  Carboxynorspermidine
C18326  p-Coumaroylputrescine
C19706  cis-3-Hydroxy-L-proline
Reference
PMID:5288244
  Authors
Haake P, Allen GW.
  Title
Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  Journal
Proc Natl Acad Sci U S A 68:2691-3 (1971)
DOI:10.1073/pnas.68.11.2691
Reference
PMID:16499623
  Authors
Kurihara S, Oda S, Kumagai H, Suzuki H.
  Title
Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  Journal
FEMS Microbiol Lett 256:318-23 (2006)
DOI:10.1111/j.1574-6968.2006.00137.x
Reference
PMID:15590624
  Authors
Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  Title
A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  Journal
J Biol Chem 280:4602-8 (2005)
DOI:10.1074/jbc.M411114200
Related
pathway
snem00020  Citrate cycle (TCA cycle)
snem00220  Arginine biosynthesis
snem00250  Alanine, aspartate and glutamate metabolism
snem00260  Glycine, serine and threonine metabolism
snem00270  Cysteine and methionine metabolism
snem00310  Lysine degradation
snem00410  beta-Alanine metabolism
snem00470  D-Amino acid metabolism
snem00480  Glutathione metabolism
snem00630  Glyoxylate and dicarboxylate metabolism
snem00650  Butanoate metabolism
snem00770  Pantothenate and CoA biosynthesis
KO pathway
ko00330   
LinkDB

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