KEGG   PATHWAY: srf00010
Entry
srf00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Sediminicoccus rosea
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
srf00010  Glycolysis / Gluconeogenesis
srf00010

Module
srf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:srf00010]
srf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:srf00010]
srf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:srf00010]
Other DBs
GO: 0006096 0006094
Organism
Sediminicoccus rosea [GN:srf]
Gene
LHU95_17530  glucokinase [KO:K00845] [EC:2.7.1.2]
LHU95_12080  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LHU95_07830  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
LHU95_13615  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
LHU95_13540  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
LHU95_21070  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
LHU95_21065  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
LHU95_05565  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
LHU95_09020  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
LHU95_19695  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LHU95_04110  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
LHU95_06680  transketolase [KO:K00163] [EC:1.2.4.1]
LHU95_09040  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
LHU95_09045  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
LHU95_09050  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
LHU95_04320  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LHU95_09060  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LHU95_14270  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LHU95_07015  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
LHU95_10375  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
LHU95_12930  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
LHU95_04560  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LHU95_22185  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
LHU95_13525  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
LHU95_22450  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
srf00020  Citrate cycle (TCA cycle)
srf00030  Pentose phosphate pathway
srf00500  Starch and sucrose metabolism
srf00620  Pyruvate metabolism
srf00640  Propanoate metabolism
srf00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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