KEGG   PATHWAY: stt00260
Entry
stt00260                    Pathway                                
Name
Glycine, serine and threonine metabolism - Salmonella enterica subsp. enterica serovar Typhi Ty2
Description
Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
Class
Metabolism; Amino acid metabolism
Pathway map
stt00260  Glycine, serine and threonine metabolism
stt00260

Module
stt_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:stt00260]
stt_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:stt00260]
stt_M00621  Glycine cleavage system [PATH:stt00260]
Other DBs
GO: 0006544 0006563 0070178 0006566
Organism
Salmonella enterica subsp. enterica serovar Typhi Ty2 [GN:stt]
Gene
t4126  lysC; lysine-sensitive aspartokinase III [KO:K00928] [EC:2.7.2.4]
t0002  thrA; aspartokinase I [KO:K12524] [EC:2.7.2.4 1.1.1.3]
t3517  metL; aspartokinase II [KO:K12525] [EC:2.7.2.4 1.1.1.3]
t3981  asd; aspartate-semialdehyde dehydrogenase [KO:K00133] [EC:1.2.1.11]
t0003  thrB; homoserine kinase [KO:K00872] [EC:2.7.1.39]
t0004  thrC; threonine synthase [KO:K01733] [EC:4.2.3.1]
t1999  ybjU; L-allo-threonine aldolase [KO:K01620] [EC:4.1.2.48]
t3514  putative serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
t0301  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
t1785  putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region [KO:K12972] [EC:1.1.1.79 1.1.1.81]
t3873  yiaE; putative 2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
t2868  conserved hypothetical protein [KO:K00865] [EC:2.7.1.165]
t0367  conserved hypothetical protein [KO:K00865] [EC:2.7.1.165]
t2336  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
t3167  conserved hypothetical protein [KO:K00865] [EC:2.7.1.165]
t2115  gpmA; phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
t4624  gpmB; probable phosphoglycerate mutase 2 [KO:K15634] [EC:5.4.2.11]
t3815  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
t2980  serA; D-3-phosphoglycerate dehydrogenase [KO:K00058] [EC:1.1.1.95 1.1.1.399]
t1957  serC; phosphoserine aminotransferase [KO:K00831] [EC:2.6.1.52]
t4617  serB; putative phosphoserine phosphatase [KO:K01079] [EC:3.1.3.3]
t1432  putative oxidoreductase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
t3810  kbl; 2-amino-3-ketobutyrate coenzyme A ligase [KO:K00639] [EC:2.3.1.29]
t3811  tdh; threonine 3-dehydrogenase [KO:K00060] [EC:1.1.1.103]
t2971  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
t2973  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
t0160  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
t2972  gcvH; glycine cleavage system H protein [KO:K02437]
t0258  pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase [KO:K00998] [EC:2.7.8.8]
t2879  sdaB; L-serine dehydratase 2 [KO:K01752] [EC:4.3.1.17]
t0659  sdaC; putative L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
t1051  sdaA; L-serine deaminase 1 [KO:K01752] [EC:4.3.1.17]
t3160  tdcG; L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
t3393  ilvA; threonine deaminase [KO:K01754] [EC:4.3.1.19]
t3164  tdcB; catabolic threonine dehydratase [KO:K01754] [EC:4.3.1.19]
t3715  dsdA; D-serine dehydratase [KO:K01753] [EC:4.3.1.18]
t2925  ygeA; conserved hypothetical protein [KO:K25316] [EC:5.1.1.10]
t1639  trpA; tryptophan synthase alpha chain [KO:K01695] [EC:4.2.1.20]
t1638  trpB; tryptophan synthase beta chain [KO:K01696] [EC:4.2.1.20]
Compound
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00037  Glycine
C00048  Glyoxylate
C00049  L-Aspartate
C00065  L-Serine
C00078  L-Tryptophan
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00109  2-Oxobutanoate
C00114  Choline
C00143  5,10-Methylenetetrahydrofolate
C00168  Hydroxypyruvate
C00188  L-Threonine
C00197  3-Phospho-D-glycerate
C00213  Sarcosine
C00258  D-Glycerate
C00263  L-Homoserine
C00300  Creatine
C00430  5-Aminolevulinate
C00441  L-Aspartate 4-semialdehyde
C00546  Methylglyoxal
C00576  Betaine aldehyde
C00581  Guanidinoacetate
C00631  2-Phospho-D-glycerate
C00719  Betaine
C00740  D-Serine
C00986  1,3-Diaminopropane
C01005  O-Phospho-L-serine
C01026  N,N-Dimethylglycine
C01102  O-Phospho-L-homoserine
C01242  [Protein]-S8-aminomethyldihydrolipoyllysine
C01888  Aminoacetone
C02051  Lipoylprotein
C02291  L-Cystathionine
C02737  Phosphatidylserine
C02972  Dihydrolipoylprotein
C03082  4-Phospho-L-aspartate
C03194  (R)-1-Aminopropan-2-ol
C03232  3-Phosphonooxypyruvate
C03283  L-2,4-Diaminobutanoate
C03508  L-2-Amino-3-oxobutanoic acid
C05519  L-Allothreonine
C06231  Ectoine
C06442  N(gamma)-Acetyldiaminobutyrate
C16432  5-Hydroxyectoine
C19929  N(alpha)-Acetyl-L-2,4-diaminobutyrate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:11823218
  Authors
Kuhlmann AU, Bremer E.
  Title
Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp.
  Journal
Appl Environ Microbiol 68:772-83 (2002)
DOI:10.1128/AEM.68.2.772-783.2002
Reference
PMID:10473374
  Authors
Canovas D, Borges N, Vargas C, Ventosa A, Nieto JJ, Santos H.
  Title
Role of Ngamma-acetyldiaminobutyrate as an enzyme stabilizer and an intermediate in the biosynthesis of hydroxyectoine.
  Journal
Appl Environ Microbiol 65:3774-9 (1999)
DOI:10.1128/AEM.65.9.3774-3779.1999
Reference
PMID:17636255
  Authors
Bursy J, Pierik AJ, Pica N, Bremer E.
  Title
Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.
  Journal
J Biol Chem 282:31147-55 (2007)
DOI:10.1074/jbc.M704023200
Reference
PMID:16707670
  Authors
Garcia-Estepa R, Argandona M, Reina-Bueno M, Capote N, Iglesias-Guerra F, Nieto JJ, Vargas C.
  Title
The ectD gene, which is involved in the synthesis of the compatible solute hydroxyectoine, is essential for thermoprotection of the halophilic bacterium Chromohalobacter salexigens.
  Journal
J Bacteriol 188:3774-84 (2006)
DOI:10.1128/JB.00136-06
Reference
PMID:15470257
  Authors
Arevalo-Rodriguez M, Pan X, Boeke JD, Heitman J
  Title
FKBP12 controls aspartate pathway flux in Saccharomyces cerevisiae to prevent toxic intermediate accumulation.
  Journal
Eukaryot Cell 3:1287-96 (2004)
DOI:10.1128/EC.3.5.1287-1296.2004
Reference
PMID:7639721
  Authors
Rees WD, Hay SM
  Title
The biosynthesis of threonine by mammalian cells: expression of a complete bacterial biosynthetic pathway in an animal cell.
  Journal
Biochem J 309 ( Pt 3):999-1007 (1995)
DOI:10.1042/bj3090999
Reference
PMID:11341914
  Authors
Jacques SL, Nieman C, Bareich D, Broadhead G, Kinach R, Honek JF, Wright GD
  Title
Characterization of yeast homoserine dehydrogenase, an antifungal target: the invariant histidine 309 is important for enzyme integrity.
  Journal
Biochim Biophys Acta 1544:28-41 (2001)
DOI:10.1016/S0167-4838(00)00203-X
Reference
PMID:15520012
  Authors
Chen X, Jhee KH, Kruger WD
  Title
Production of the neuromodulator H2S by cystathionine beta-synthase via the condensation of cysteine and homocysteine.
  Journal
J Biol Chem 279:52082-6 (2004)
DOI:10.1074/jbc.C400481200
Related
pathway
stt00010  Glycolysis / Gluconeogenesis
stt00020  Citrate cycle (TCA cycle)
stt00230  Purine metabolism
stt00250  Alanine, aspartate and glutamate metabolism
stt00270  Cysteine and methionine metabolism
stt00290  Valine, leucine and isoleucine biosynthesis
stt00300  Lysine biosynthesis
stt00330  Arginine and proline metabolism
stt00460  Cyanoamino acid metabolism
stt00470  D-Amino acid metabolism
stt00564  Glycerophospholipid metabolism
stt00600  Sphingolipid metabolism
stt00620  Pyruvate metabolism
stt00630  Glyoxylate and dicarboxylate metabolism
stt00640  Propanoate metabolism
stt00680  Methane metabolism
stt00860  Porphyrin metabolism
stt00920  Sulfur metabolism
KO pathway
ko00260   
LinkDB

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