KEGG   PATHWAY: und00230
Entry
und00230                    Pathway                                
Name
Purine metabolism - Undibacterium sp. KW1
Class
Metabolism; Nucleotide metabolism
Pathway map
und00230  Purine metabolism
und00230

Module
und_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:und00230]
und_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:und00230]
und_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:und00230]
und_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:und00230]
und_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:und00230]
und_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:und00230]
und_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:und00230]
Other DBs
GO: 0006163 0042278
Organism
Undibacterium sp. KW1 [GN:und]
Gene
UNDKW_3004  ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
UNDKW_4622  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
UNDKW_0633  prsA; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
UNDKW_2854  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
UNDKW_3258  purD; phosphoribosylamine-glycine ligase [KO:K01945] [EC:6.3.4.13]
UNDKW_1555  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
UNDKW_2755  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
UNDKW_0660  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
UNDKW_3792  purK; N5-carboxyaminoimidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
UNDKW_3793  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
UNDKW_3794  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
UNDKW_0956  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
UNDKW_4780  purH; bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
UNDKW_0530  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
UNDKW_5294  multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase [KO:K01081] [EC:3.1.3.5]
UNDKW_1907  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
UNDKW_2200  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
UNDKW_0097  deoD; purine nucleoside phosphorylase DeoD-type [KO:K03784] [EC:2.4.2.1]
UNDKW_1711  UPF0345 protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
UNDKW_2742  laccase domain protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
UNDKW_2700  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
UNDKW_2205  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
UNDKW_2267  non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
UNDKW_5498  xdhA; xanthine dehydrogenase [KO:K13481] [EC:1.17.1.4]
UNDKW_5497  xdhB; xanthine dehydrogenase large subunit [KO:K13482] [EC:1.17.1.4]
UNDKW_0601  GMP synthase [KO:K01951] [EC:6.3.5.2]
UNDKW_2698  guaA; GMP synthase [glutamine-hydrolyzing] [KO:K01951] [EC:6.3.5.2]
UNDKW_1255  guaC; GMP reductase [KO:K00364] [EC:1.7.1.7]
UNDKW_5495  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
UNDKW_2262  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
UNDKW_4633  ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
UNDKW_0859  nrdA; ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
UNDKW_0860  nrdB; ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
UNDKW_0513  deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
UNDKW_4674  hypothetical protein [KO:K06952] [EC:3.1.3.89]
UNDKW_2260  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
UNDKW_3046  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
UNDKW_2993  relA; GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
UNDKW_2575  CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
UNDKW_1017  gidA; adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
UNDKW_1293  hypothetical protein [KO:K01768] [EC:4.6.1.1]
UNDKW_1999  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
UNDKW_5275  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
UNDKW_2219  purA; adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
UNDKW_2064  hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
UNDKW_0038  add; adenine deaminase [KO:K21053] [EC:3.5.4.2]
UNDKW_2893  cpdB; bifunctional metallophosphatase/5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
UNDKW_1549  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
UNDKW_0880  apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [KO:K01525] [EC:3.6.1.41]
UNDKW_4891  hypothetical protein [KO:K00860] [EC:2.7.1.25]
UNDKW_2678  cysC-2; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
UNDKW_2952  cysN; sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
UNDKW_2951  cysD; sulfate adenylyltransferase [KO:K00957] [EC:2.7.7.4]
UNDKW_5661  5-hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
UNDKW_0018  hypothetical protein [KO:K16842] [EC:3.5.2.5]
UNDKW_5662  hypothetical protein [KO:K02083] [EC:3.5.3.9]
UNDKW_3564  amaB; Zn-dependent hydrolase [KO:K02083] [EC:3.5.3.9]
UNDKW_2329  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
UNDKW_2328  ureB; urease subunit beta [KO:K01429] [EC:3.5.1.5]
UNDKW_2327  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
und00030  Pentose phosphate pathway
und00220  Arginine biosynthesis
und00250  Alanine, aspartate and glutamate metabolism
und00260  Glycine, serine and threonine metabolism
und00340  Histidine metabolism
und00630  Glyoxylate and dicarboxylate metabolism
und00730  Thiamine metabolism
und00740  Riboflavin metabolism
und00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system