KEGG   PATHWAY: xen00240
Entry
xen00240                    Pathway                                
Name
Pyrimidine metabolism - Xenia sp. Carnegie-2017 (soft corals)
Class
Metabolism; Nucleotide metabolism
Pathway map
xen00240  Pyrimidine metabolism
xen00240

Module
xen_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:xen00240]
xen_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:xen00240]
xen_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xen00240]
xen_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xen00240]
Other DBs
GO: 0006220 0006213
Organism
Xenia sp. Carnegie-2017 (soft corals) [GN:xen]
Gene
124450795  CAD protein-like isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
124459046  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
124435391  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124440263  UMP-CMP kinase-like [KO:K13800] [EC:2.7.4.14]
124440874  UMP-CMP kinase 2, mitochondrial-like isoform X1 [KO:K13809] [EC:2.7.4.14]
124445866  nucleoside diphosphate kinase A-like isoform X1 [KO:K00940] [EC:2.7.4.6]
124437122  uncharacterized protein LOC124437122 [KO:K00940] [EC:2.7.4.6]
124446675  LOW QUALITY PROTEIN: nucleoside diphosphate kinase-like [KO:K00940] [EC:2.7.4.6]
124447386  nucleoside diphosphate kinase 7-like [KO:K00940] [EC:2.7.4.6]
124450892  nucleoside diphosphate kinase 6-like [KO:K00940] [EC:2.7.4.6]
124451598  nucleoside diphosphate kinase 6-like isoform X1 [KO:K00940] [EC:2.7.4.6]
124451599  nucleoside diphosphate kinase 6-like [KO:K00940] [EC:2.7.4.6]
124442482  adenylate kinase 9-like [KO:K18533] [EC:2.7.4.3 2.7.4.6]
124444543  ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
124448475  LOW QUALITY PROTEIN: soluble calcium-activated nucleotidase 1-like [KO:K12304] [EC:3.6.1.6]
124444705  ectonucleoside triphosphate diphosphohydrolase 4-like [KO:K12305] [EC:3.6.1.6]
124452774  ectonucleoside triphosphate diphosphohydrolase 6-like [KO:K01511] [EC:3.6.1.6]
124439606  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124450318  uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
124436868  mannosylglucosyl-3-phosphoglycerate phosphatase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124443983  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124441799  LOW QUALITY PROTEIN: 5'-nucleotidase-like [KO:K19970] [EC:3.1.3.5]
124440677  uridine phosphorylase 2-like isoform X1 [KO:K00757] [EC:2.4.2.3]
124459631  pseudouridine-metabolizing bifunctional protein C1861.05-like isoform X1 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
124453148  7-methylguanosine phosphate-specific 5'-nucleotidase A-like [KO:K24242] [EC:3.1.3.91]
124446998  cytidine deaminase-like [KO:K01489] [EC:3.5.4.5]
124445975  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124440785  LOW QUALITY PROTEIN: ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124443692  ribonucleoside-diphosphate reductase subunit M2 B-like [KO:K10808] [EC:1.17.4.1]
124452321  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124445655  deoxycytidylate deaminase-like [KO:K01493] [EC:3.5.4.12]
124446630  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
124450823  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
124438954  thymidine phosphorylase-like [KO:K00758] [EC:2.4.2.4]
124436964  thymidine kinase 2, mitochondrial-like isoform X1 [KO:K00857] [EC:2.7.1.21]
124447838  thymidine kinase, cytosolic-like isoform X1 [KO:K00857] [EC:2.7.1.21]
124458580  LOW QUALITY PROTEIN: thymidylate synthase-like [KO:K00560] [EC:2.1.1.45]
124434293  dihydropyrimidine dehydrogenase [NADP(+)]-like [KO:K00207] [EC:1.3.1.2]
124452864  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
124434763  beta-ureidopropionase-like [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
xen00030  Pentose phosphate pathway
xen00220  Arginine biosynthesis
xen00250  Alanine, aspartate and glutamate metabolism
xen00280  Valine, leucine and isoleucine degradation
xen00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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