KEGG   PATHWAY: xph00040
Entry
xph00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Xanthomonas phaseoli
Class
Metabolism; Carbohydrate metabolism
Pathway map
xph00040  Pentose and glucuronate interconversions
xph00040

Module
xph_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xph00040]
Organism
Xanthomonas phaseoli [GN:xph]
Gene
XppCFBP6546_01165  XppCFBP6546P_01165; pectate lyase [KO:K01728] [EC:4.2.2.2]
XppCFBP6546_20840  XppCFBP6546P_20840; hypothetical protein [KO:K01728] [EC:4.2.2.2]
XppCFBP6546_16520  XppCFBP6546P_16520; pectate lyase [KO:K01728] [EC:4.2.2.2]
XppCFBP6546_11085  kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase [KO:K01815] [EC:5.3.1.17]
XppCFBP6546_11080  kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD [KO:K00065] [EC:1.1.1.127]
XppCFBP6546_01150  XppCFBP6546P_01150; glycoside hydrolase family 28 protein [KO:K01184] [EC:3.2.1.15]
XppCFBP6546_08270  XppCFBP6546P_08270; endopolygalacturonase [KO:K01184] [EC:3.2.1.15]
XppCFBP6546_13075  uxaC; glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
XppCFBP6546_13195  XppCFBP6546P_13195; D-galactonate dehydratase family protein [KO:K08323] [EC:4.2.1.8]
XppCFBP6546_13180  XppCFBP6546P_13180; mannitol dehydrogenase family protein [KO:K00040] [EC:1.1.1.57]
XppCFBP6546_16430  XppCFBP6546P_16430; nucleotide sugar dehydrogenase [KO:K00012] [EC:1.1.1.22]
XppCFBP6546_01565  galU; UTP--glucose-1-phosphate uridylyltransferase GalU [KO:K00963] [EC:2.7.7.9]
XppCFBP6546_09390  XppCFBP6546P_09390; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
XppCFBP6546_13105  XppCFBP6546P_13105; FGGY-family carbohydrate kinase [KO:K00854] [EC:2.7.1.17]
XppCFBP6546_19180  xylB; xylulokinase [KO:K00854] [EC:2.7.1.17]
XppCFBP6546_19185  xylA; xylose isomerase [KO:K01805] [EC:5.3.1.5]
XppCFBP6546_13215  xylA; xylose isomerase [KO:K01805] [EC:5.3.1.5]
XppCFBP6546_19685  XppCFBP6546P_19685; aldehyde dehydrogenase family protein [KO:K13877] [EC:1.2.1.26]
XppCFBP6546_13110  XppCFBP6546P_13110; class II aldolase/adducin family protein [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
xph00010  Glycolysis / Gluconeogenesis
xph00020  Citrate cycle (TCA cycle)
xph00030  Pentose phosphate pathway
xph00052  Galactose metabolism
xph00053  Ascorbate and aldarate metabolism
xph00500  Starch and sucrose metabolism
xph00520  Amino sugar and nucleotide sugar metabolism
xph00561  Glycerolipid metabolism
xph00562  Inositol phosphate metabolism
xph00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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