Spliceosome

[ Brite menu | Download htext | Download json | Help ]
Search

1st Level  2nd Level  3rd Level  4th Level 

 Common components
 
 Complex A
   U1 snRNP components
     Sm proteins
     U1 snRNP specific factors
     U1 related factors
       K12823  DDX5, DBP2; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
       K12821  PRPF40, PRP40; pre-mRNA-processing factor 40
       K12822  RBM25, S164; RNA-binding protein 25
       K12824  TCERG1, CA150; transcription elongation regulator 1
   U2 snRNP components
     Sm proteins
     U2 snRNP specific factors
     U2 related factors
       K12836  U2AF1; splicing factor U2AF 35 kDa subunit
       K12837  U2AF2; splicing factor U2AF 65 kDa subunit
       K12841  CHERP; calcium homeostasis endoplasmic reticulum protein
       K12820  DHX15, PRP43; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
       K12811  DDX46, PRP5; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
       K12838  PUF60; poly(U)-binding-splicing factor PUF60
       K12840  RBM17, SPF45; splicing factor 45
       K12839  SMNDC1, SPF30; survival of motor neuron-related-splicing factor 30
       K12842  SR140; U2-associated protein SR140
       K19604  RP9, PAP-1; retinitis pigmentosa 9 protein
       K24273  ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
   Other components
 
 Complex B
   U1 snRNP components
     Sm proteins
     U1 snRNP specific factors
     U1 related factors
       K12823  DDX5, DBP2; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
       K12821  PRPF40, PRP40; pre-mRNA-processing factor 40
       K12822  RBM25, S164; RNA-binding protein 25
       K12824  TCERG1, CA150; transcription elongation regulator 1
   U2 snRNP components
     Sm proteins
     U2 snRNP specific factors
     U2 related factors
       K12836  U2AF1; splicing factor U2AF 35 kDa subunit
       K12837  U2AF2; splicing factor U2AF 65 kDa subunit
       K12841  CHERP; calcium homeostasis endoplasmic reticulum protein
       K12820  DHX15, PRP43; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
       K12811  DDX46, PRP5; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
       K12838  PUF60; poly(U)-binding-splicing factor PUF60
       K12840  RBM17, SPF45; splicing factor 45
       K12839  SMNDC1, SPF30; survival of motor neuron-related-splicing factor 30
       K12842  SR140; U2-associated protein SR140
       K19604  RP9, PAP-1; retinitis pigmentosa 9 protein
       K24273  ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
   U4/U6.U5 tri-snRNP components
     Sm proteins
     LSm proteins
     U4/U6 snRNP specific factors
     U5 snRNP specific factors
     U4/U6.U5 tri-snRNP specific factors
     U4/U6.U5 tri-snRNP related factors
       K12848  SNU23; U4/U6.U5 tri-snRNP component SNU23
       K12849  PRPF38A; pre-mRNA-splicing factor 38A
       K12850  PRPF38B; pre-mRNA-splicing factor 38B
       K12851  PRP38; pre-mRNA-splicing factor 38
       K13100  CWC22; pre-mRNA-splicing factor CWC22
       K12598  MTR4, SKIV2L2; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
       K12813  DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
       K12814  PRP2; pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:5.6.2.6]
       K13101  GPKOW; G patch domain and KOW motifs-containing protein
       K28512  SPP2; pre-mRNA-splicing factor SPP2
       K04455  HSPB1; heat shock protein beta-1
       K10598  PPIL2, CYC4, CHP60; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
       K13104  ZNF830, CCDC16; zinc finger protein 830
       K19604  RP9, PAP-1; retinitis pigmentosa 9 protein
   Other components
     Prp19 complex
     Prp19-related factors
       K06063  SNW1, SKIIP, SKIP; SNW domain-containing protein 1
       K12867  SYF1, XAB2; pre-mRNA-splicing factor SYF1
       K12868  SYF2; pre-mRNA-splicing factor SYF2
       K12869  CRN, CRNKL1, CLF1, SYF3; crooked neck
       K12874  AQR; intron-binding protein aquarius
       K12873  BUD31, G10; bud site selection protein 31
       K12871  CCDC12; coiled-coil domain-containing protein 12
       K12870  ISY1; pre-mRNA-splicing factor ISY1
       K09564  PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
       K12733  PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
       K13105  PRCC; proline-rich protein PRCC
       K12872  RBM22, SLT11; pre-mRNA-splicing factor RBM22/SLT11
       K25780  KHDC4, BLOM7; kelch domain-containing protein 4
       K27398  CWC2; pre-mRNA-splicing factor CWC2
     RES complex
     Complex B specific factors
 
 Complex C
   U2 snRNP components
   U4/U6.U5 tri-snRNP components
     Sm proteins
     U5 SnRNP specific factors
     U4/U6.U5 tri-SnRNP related factors
       K13100  CWC22; pre-mRNA-splicing factor CWC22
       K12598  MTR4, SKIV2L2; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
       K12820  DHX15, PRP43; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
       K04455  HSPB1; heat shock protein beta-1
       K10598  PPIL2, CYC4, CHP60; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
       K13104  ZNF830, CCDC16; zinc finger protein 830
       K13103  TFIP11; tuftelin-interacting protein 11
       K19604  RP9, PAP-1; retinitis pigmentosa 9 protein
   Other components
     Prp19-CDC5 complex
     Prp19-related factors
       K06063  SNW1, SKIIP, SKIP; SNW domain-containing protein 1
       K12867  SYF1, XAB2; pre-mRNA-splicing factor SYF1
       K12868  SYF2; pre-mRNA-splicing factor SYF2
       K12869  CRN, CRNKL1, CLF1, SYF3; crooked neck
       K12874  AQR; intron-binding protein aquarius
       K12873  BUD31, G10; bud site selection protein 31
       K12871  CCDC12; coiled-coil domain-containing protein 12
       K12870  ISY1; pre-mRNA-splicing factor ISY1
       K12733  PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
       K09564  PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
       K12872  RBM22, SLT11; pre-mRNA-splicing factor RBM22/SLT11
     RES complex
     EJC/TREX
     Step II factors
     PPlases
     hnRNP proteins
     Complex C specific factors
 
 Other splicing related proteins
   Proteins involved in snRNP biogenesis
     SMN complex factors
     Integrator complex
     Other proteins involved in snRNP biogenesis
       K13150  COIL, CLN80; coilin
       K12839  SMNDC1, SPF30; survival of motor neuron-related-splicing factor 30
       K13151  SNUPN, RNUT1; snurportin-1
       K23093  USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
       K28400  THUMPD2; U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
       K15448  TRM112, TRMT112; multifunctional methyltransferase subunit TRM112
       K05019  CLNS1A; chloride channel, nucleotide-sensitive, 1A
       K14292  TGS1; trimethylguanosine synthase [EC:2.1.1.-]
       K13180  INTS6L, DDX26B; integrator complex subunit 6-like
       K06874  ZPR1; zinc finger protein ZPR1
   Minor spliceosome components
   Spliceosome associated proteins (SAPs)
     hnRNP proteins
     SR proteins
       K12899  SRSF11, SFRS11; serine/arginine-rich splicing factor 11
       K13165  SREK1, SFRS12; splicing regulatory glutamine/lysine-rich protein 1
       K13166  SUGP2, SFRS14; SURP and G-patch domain-containing protein 2
       K13167  SCAF4, SFRS15; SR-related and CTD-associated factor 4
       K13168  CLASRP, SFRS16; CLK4-associating serine/arginine rich protein
       K13169  AKAP17, SFRS17; A-kinase anchor protein 17
       K13170  PNISR, SFRS18; arginine/serine-rich protein PNISR
       K25101  SRSF12; serine/arginine-rich splicing factor 12
       K28949  ARL6IP4; ADP-ribosylation factor-like protein 6-interacting protein 4
     SR-related proteins
       K13171  SRRM1, SRM160; serine/arginine repetitive matrix protein 1
       K13172  SRRM2, SRM300; serine/arginine repetitive matrix protein 2
       K13173  ARGLU1; arginine and glutamate-rich protein 1
       K23718  SON; protein SON
       K25057  PSIP1, LEDGF; PC4 and SFRS1-interacting protein
       K25781  ILDR1; immunoglobulin-like domain-containing receptor 1
       K25782  ILDR2; immunoglobulin-like domain-containing receptor 2
       K26076  ZRANB2; zinc finger Ran-binding domain-containing protein 2
     TREX complex
     RNA helicase-like proteins
     RNA binding proteins (RBPs)
     Other SAPs
 
 Splicing related RNAs
   K14276 U1snRNA; U1 spliceosomal RNA
   K14277 U2snRNA; U2 spliceosomal RNA
   K14278 U4snRNA; U4 spliceosomal RNA
   K14279 U5snRNA; U5 spliceosomal RNA
   K14280 U6snRNA; U6 spliceosomal RNA
   K28308  RNU7; U7 small nuclear RNA
   K28309  RNU11; U11 small nuclear RNA
   K28310  RNU12; U12 small nuclear RNA
   K26388  RNU4ATAC; U4atac small nuclear RNA
   K26387  RNU6ATAC; U6atac small nuclear RNA
   K27200  SNORD7; small nucleolar RNA SNORD7
   K27201  SNORD8_9; small nucleolar RNA SNORD8/9
   K27206  SNORD10; small nucleolar RNA SNORD10
   K26386  SNORD115; small nucleolar RNA SNORD115
   K27152  SCARNA1, ACA35; small Cajal body-specific RNA 1
   K27161  SCARNA2; small Cajal body-specific RNA 2
   K28401  SCARNA3; small Cajal body-specific RNA 3
   K27153  SCARNA4, ACA26; small Cajal body-specific RNA 4
   K27154  SCARNA6, SCARNA5; small Cajal body-specific RNA 6
   K27166  SCARNA7, U90; small Cajal body-specific RNA 7
   K27167  SCARNA8, U92; small Cajal body-specific RNA 8
   K27168  SCARNA9; small Cajal body-specific RNA 9
   K27155  SCARNA10, U85; small Cajal body-specific RNA 10
   K27156  SCARNA11, ACA57; small Cajal body-specific RNA 11
   K27157  SCARNA12, U89; small Cajal body-specific RNA 12
   K27169  SCARNA13, U93; small Cajal body-specific RNA 13
   K27170  SCARNA14, U100; small Cajal body-specific RNA 14
   K27158  SCARNA15, ACA45; small Cajal body-specific RNA 15
   K27159  SCARNA16, ACA47; small Cajal body-specific RNA 16
   K27171  SCARNA17, U91; small Cajal body-specific RNA 17
   K27172  SCARNA18, U109; small Cajal body-specific RNA 18
   K28311  SCARNA20, ACA66; small Cajal body-specific RNA 20
   K28312  SCARNA21, ACA68; small Cajal body-specific RNA 21
   K28313  SCARNA23, SCARNA22; small Cajal body-specific RNA 23
   K27160  SCARNA24, SCARNA23; small Cajal body-specific RNA 24
   K28451  SCARNA28, ZL1; small Cajal body-specific RNA 28

[ BRITE | KEGG2 | KEGG ]
Last updated: April 22, 2026