SSDB Best Search Result

Entry:cbu:CBU_1189 (440 a.a.)
Name:recombination factor protein RarA
KO:K07478 putative ATPase

Search Result : 211 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
pae:PA2613 recombination factor protein RarA            K07478     441     1789     0.651      424     
mca:MCA1782 ATPase, AAA family                          K07478     435     1746     0.621      430     
avn:Avin_28200 recombination factor protein RarA        K07478     441     1738     0.637      424     
psb:Psyr_3177 Recombination protein MgsA                K07478     440     1729     0.633      425     
ppu:PP_4002 DNA-dependent ATPase required for recombina K07478     441     1727     0.632      424     
pst:PSPTO_3347 ATPase, AAA family                       K07478     440     1701     0.625      424     
hin:HI_1590 conserved hypothetical protein              K07478     446     1674     0.587      436     
cro:ROD_09561 putative ATPase                           K07478     447     1669     0.589      426     
eam:EAMY_1337 Uncharacterized protein ycaJ              K07478     447     1665     0.585      441     
ecs:ECs_0977 recombination intermediate processing DNA- K07478     447     1664     0.579      437     
eco:b0892 replication-associated recombination protein  K07478     447     1664     0.579      437     
ecj:JW0875 recombination protein                        K07478     447     1664     0.579      437     
ece:Z1238 putative polynucleotide enzyme                K07478     447     1664     0.579      437     
pmu:PM0257 unknown                                      K07478     445     1663     0.593      430     
kpn:KPN_00924 putative polynucleotide enzyme            K07478     447     1661     0.579      437     
sfl:SF0851 recombination factor protein RarA            K07478     447     1660     0.579      437     
enc:ECL_02758 recombination factor protein RarA         K07478     447     1659     0.587      426     
seo:STM14_1086 recombination factor protein RarA        K07478     447     1657     0.574      441     
sty:STY0960 conserevd hypothetical protein              K07478     447     1657     0.574      441     
stm:STM0962 putative polynucleotide enzyme              K07478     447     1657     0.574      441     
vfi:VF_0907 recombination protein                       K07478     448     1656     0.569      432     
vch:VC_1108 conserved hypothetical protein              K07478     449     1650     0.575      431     
ddd:Dda3937_00131 recombination protein                 K07478     447     1636     0.567      436     
smar:SM39_1149 recombination protein                    K07478     448     1629     0.565      441     
yen:YE1527 putative ATPase protein                      K07478     447     1626     0.565      437     
yps:YPTB1403 putative polynucleotide ATPase protein     K07478     447     1620     0.563      437     
ypk:y2797 putative polynucleotide enzyme                K07478     447     1620     0.563      437     
ype:YPO1378 putative ATPase protein                     K07478     447     1620     0.563      437     
hdu:HD_1296 conserved hypothetical protein              K07478     446     1616     0.564      438     
son:SO_2308 AAA ATPase family protein                   K07478     443     1608     0.556      428     
vpa:VP1107 conserved hypothetical protein               K07478     449     1602     0.558      439     
vvu:VV1_2947 ATPase, AAA family                         K07478     449     1597     0.560      430     
eca:ECA2645 putative ATPase                             K07478     447     1594     0.553      436     
eba:ebA7036 predicted ATPase related to the uncharacter K07478     446     1591     0.590      429     
bpe:BP2471 conserved hypothetical protein               K07478     446     1584     0.575      431     
apl:APL_0438 hypothetical protein                       K07478     446     1572     0.559      435     
xcc:XCC1976 ATPase                                      K07478     428     1572     0.573      422     
xac:XAC2010 ATPase                                      K07478     429     1567     0.568      428     
xfa:XF_1453 conserved hypothetical protein              K07478     429     1566     0.567      420     
xom:XOO2401 ATPase                                      K07478     430     1559     0.571      422     
bxe:Bxe_A3436 Recombination protein MgsA                K07478     437     1545     0.569      434     
ngo:NGO_0696 recombination factor protein RarA          K07478     436     1542     0.576      425     
reh:H16_A0763 ATPase related to the helicase subunit of K07478     455     1537     0.587      424     
rso:RSc2338 putative atpase related to the helicase sub K07478     449     1535     0.573      438     
nme:NMB1258 conserved hypothetical protein              K07478     436     1535     0.576      425     
bma:BMA2120 ATPase, AAA family protein                  K07478     455     1509     0.573      424     
bps:BPSL2602 putative ATPase protein                    K07478     455     1509     0.573      424     
lpn:lpg1764 ATPase associated with chromosome architect K07478     434     1494     0.564      427     
cau:Caur_0421 AAA ATPase central domain protein         K07478     497     1422     0.539      432     
lcb:LCABL_01590 Chromosome segregation helicase (Putati K07478     448     1393     0.497      441     
gsu:GSU2067 stalled replication fork rescue ATPase      K07478     440     1368     0.518      425     
ccr:CC_1283 ATPase, AAA family                          K07478     433     1333     0.511      427     
rsp:RSP_1743 Recombination protein MgsA                 K07478     437     1332     0.496      427     
dra:DR_1898 conserved hypothetical protein              K07478     434     1314     0.518      427     
pde:Pden_0788 Recombination protein MgsA                K07478     442     1313     0.492      431     
cac:CA_C0326 ATPase related to the helicase subunit of  K07478     443     1308     0.476      429     
rru:Rru_A2660 Recombination protein MgsA                K07478     439     1297     0.484      430     
rle:RL1807 putative ATPase AAA family protein           K07478     438     1295     0.507      426     
sme:SMc01279 Conserved hypothetical protein             K07478     436     1292     0.493      428     
ret:RHE_CH01708 putative ATPase associated with chromos K07478     438     1281     0.496      425     
mlo:mlr0329 hypothetical protein                        K07478     435     1274     0.492      427     
bja:bll5367 ORF_ID:bll5367; hypothetical protein        K07478     445     1271     0.496      425     
lpl:lp_1543 recombination factor protein RarA; ATPase,  K07478     458     1265     0.504      425     
rpa:TX73_016655 replication-associated recombination pr K07478     443     1262     0.491      422     
atu:Atu1914 ATPase, AAA family protein                  K07478     438     1262     0.489      425     
bme:BMEI0784 atpase associated with chromosome architec K07478     457     1235     0.477      428     
bmf:BAB1_1228 Shikimate kinase:Replication factor C con K07478     437     1233     0.477      428     
bth:BT_1205 putative ATPase, AAA family                 K07478     422     1232     0.469      418     
bms:BR1206 ATPase, AAA family                           K07478     437     1231     0.477      428     
cte:CT0757 ATPase, AAA family                           K07478     451     1220     0.465      424     
acb:A1S_3427 putative ATPase                            K07478     421     1204     0.463      428     
bfr:BF1883 putative AAA family ATPase                   K07478     423     1199     0.455      418     
tth:TT_C1523 ATPase                                     K07478     421     1197     0.500      422     
aci:ACIAD3596 putative ATPase                           K07478     423     1161     0.445      431     
fps:FP1349 Putative AAA family ATPase                   K07478     425     1154     0.439      419     
mta:Moth_1656 Recombination protein MgsA                K07478     441     1136     0.454      416     
amd:AMED_2708 putative ATPase                           K07478     458     1123     0.453      422     
msm:MSMEG_3021 AAA ATPase, central region               K07478     447     1121     0.452      427     
gvi:glr2109 ORF_ID:glr2109; hypothetical protein        K07478     747     1118     0.448      424     
xla:734231 Werner helicase interacting protein 1 L home K07478     572     1116     0.465      428     
ath:AT1G24290 AAA-type ATPase family protein            K07478     525     1115     0.474      416     
xtr:100158593 ATPase WRNIP1                             K07478     577     1108     0.466      429     
gga:395089 ATPase WRNIP1                                K07478     562     1107     0.473      438     
blo:BL0029 widely conserved hypothetical protein with p K07478     459     1102     0.450      436     
tde:TDE_0016 ATPase, AAA family                         K07478     441     1102     0.442      430     
ecb:100057489 ATPase WRNIP1 isoform X1                  K07478     667     1095     0.465      437     
dre:405856 ATPase WRNIP1                                K07478     546     1094     0.471      427     
rno:282835 ATPase WRNIP1                                K07478     660     1094     0.469      441     
spo:2542096 DNA replication ATPase                      K07478     504     1093     0.449      425     
hsa:56897 WRN helicase interacting protein 1            K07478     665     1092     0.462      437     
mmu:78903 Werner helicase interacting protein 1         K07478     660     1092     0.469      441     
mcc:707250 ATPase WRNIP1                                K07478     665     1091     0.460      437     
ani:ANIA_05617 ssDNA-dependent ATPase MGS1              K07478     528     1091     0.450      413     
cfa:478698 ATPase WRNIP1                                K07478     655     1091     0.460      437     
mtu:Rv2559c hypothetical protein                        K07478     452     1089     0.431      427     
mtc:MT2636 ATPase, AAA family                           K07478     452     1089     0.431      427     
ocu:100353724 ATPase WRNIP1 isoform X1                  K07478     666     1084     0.460      437     
vvi:100258647 uncharacterized protein LOC100258647      K07478     548     1084     0.460      446     
afm:AFUA_4G11180 AAA family ATPase                      K07478     539     1082     0.456      419     
fca:101087922 ATPase WRNIP1 isoform X1                  K07478     663     1081     0.460      437     
tca:659756 ATPase WRNIP1                                K07478     494     1081     0.455      391     
cgl:Cgl1633 Uncharacterized ATPase related to the helic K07478     459     1075     0.434      422     
mtr:11425299 ATPase WRNIP1                              K07478     551     1074     0.452      431     
ame:409392 ATPase WRNIP1                                K07478     528     1072     0.443      429     
ssc:100155921 ATPase WRNIP1                             K07478     638     1071     0.449      439     
ola:101169976 ATPase WRNIP1                             K07478     586     1070     0.470      432     
aor:AO090003001104 unnamed protein product; ATPase rela K07478     527     1070     0.443      413     
gmx:100799257 ATPase WRNIP1                             K07478     535     1069     0.448      431     
pma:Pro_0091 ATPase                                     K07478     446     1069     0.424      429     
csv:101220463 LOW QUALITY PROTEIN: ATPase WRNIP1        K07478     542     1068     0.446      433     
rha:RHA1_ro07134 ATPase related to the helicase subunit K07478     478     1068     0.443      433     
aga:133394101 ATPase WRNIP1-like                        K07478     587     1060     0.455      437     
ddi:DDB_G0272158 hypothetical protein                   K07478     876     1059     0.434      426     
sly:101246334 uncharacterized protein                   K07478     583     1057     0.446      437     
mle:ML0510 conserved hypothetical protein               K07478     473     1055     0.427      429     
bta:788824 ATPase WRNIP1                                K07478     638     1054     0.458      437     
sgu:SGLAU_06065 putative AAA domain-containing protein  K07478     451     1051     0.422      427     
mab:MAB_2853c Conserved hypothetical protein            K07478     451     1044     0.423      423     
ksk:KSE_14270 putative ATPase                           K07478     449     1038     0.426      425     
aag:5563667 ATPase WRNIP1                               K07478     560     1037     0.438      429     
fgr:FGSG_12264 hypothetical protein                     K07478     654     1037     0.442      414     
sma:SAVERM_6846 putative ATP/GTP-binding protein        K07478     453     1036     0.417      427     
cit:102614520 uncharacterized protein LOC102614520      K07478     558     1032     0.439      428     
mgr:MGG_17505 AAA family ATPase                         K07478     575     1032     0.427      429     
sco:SCO1506 conserved ATP/GTP binding protein           K07478     451     1032     0.418      426     
ncr:NCU08706 AAA family ATPase                          K07478     622     1024     0.434      424     
sce:YNL218W ssDNA-dependent ATPase MGS1                 K07478     587     1021     0.419      434     
sct:SCAT_5317 putative helicase associated protein (ATP K07478     450     1020     0.417      427     
mdo:100021403 Werner helicase interacting protein 1     K07478     744     1020     0.429      473     
kla:KLLA0_D19360g uncharacterized protein               K07478     559     1019     0.418      431     
mdm:103427450 uncharacterized protein                   K07478     588     1018     0.435      444     
dvu:DVU_1686 ATPase, AAA family                         K07478     411     1012     0.428      430     
cdi:DIP1351 Conserved hypothetical protein (putative AT K07478     456     1010     0.413      424     
cne:CNH00610 helicase, putative                         K07478     626     1007     0.409      469     
sgr:SGR_6028 putative ATP/GTP-binding protein           K07478     459     1001     0.407      427     
bmor:101735527 ATPase WRNIP1 isoform X1                 K07478     512      986     0.423      430     
cal:CAALFM_C103260WA ssDNA-dependent ATPase             K07478     678      971     0.391      463     
vg:18563289 Bacillus phage G; clamp loader of DNA polym K07478     442      967     0.403      447     
fnu:FN0297 ATPase associated with chromosome architectu K07478     407      957     0.424      417     
bce:BC4394 ATPase, AAA family                           K07478     428      944     0.378      429     
btk:BT9727_4131 ATPase, AAA family                      K07478     428      940     0.381      430     
ban:BA_4628 ATPase, AAA family                          K07478     428      939     0.381      430     
lil:LA_1179 recombination factor protein RarA           K07478     423      931     0.394      426     
lin:lin1549 similar to unknown protein                  K07478     427      929     0.386      430     
lmo:lmo1514 recombination factor protein RarA           K07478     425      918     0.387      424     
tma:TM0508 conserved hypothetical protein               K07478     599      908     0.389      422     
efa:EF1979 ATPase, AAA family                           K07478     425      893     0.372      425     
bsu:BSU27530 ATPase                                     K07478     421      882     0.378      415     
ser:SERP1190 ATPase, AAA family                         K07478     423      844     0.372      403     
ljo:LJ_0949 hypothetical protein                        K07478     431      842     0.353      428     
sau:SA1454 conserved hypothetical protein               K07478     424      833     0.364      426     
sao:SAOUHSC_01734 recombination factor protein RarA     K07478     424      832     0.364      426     
spy:SPy_1992 conserved hypothetical protein             K07478     422      832     0.361      399     
llm:llmg_0103 chromosome segregation helicase           K07478     419      827     0.379      428     
spn:SP_1790 ATPase, AAA family                          K07478     423      826     0.351      425     
spr:spr1616 Chromosome segregation helicase             K07478     423      825     0.351      425     
lla:L99272 chromosome segregation helicase              K07478     419      822     0.374      428     
cdf:CD630_12760 putative replication-associated recombi K07478     421      818     0.346      422     
ftu:FTT_1443c ATPase, AAA family                        K07478     300      815     0.428      313     
cpe:CPE1787 conserved hypothetical protein              K07478     408      810     0.344      410     
smu:SMU_2056 putative ATPase                            K07478     427      795     0.352      406     
cbo:CBO2570 putative ATPase                             K07478     416      791     0.334      422     
hpy:HP_1026 conserved hypothetical helicase-like protei K07478     391      745     0.368      394     
hpj:jhp_0398 putative                                   K07478     391      742     0.368      394     
cje:Cj0198c recombination factor protein RarA           K07478     393      637     0.333      418     
pfa:PF3D7_1112600 ATPase, putative                                 707      279     0.301      173     
sai:Saci_0906 replication factor C                      K04800     437      232     0.289      256     
mth:MTH_241 replication factor C, small subunit         K04801     321      229     0.253      288     
rco:RC0533 holliday junction DNA helicase RuvB          K03551     354      226     0.282      305     
wol:WD_1112 Holliday junction DNA helicase RuvB         K03551     326      217     0.283      251     
pti:PHATRDRAFT_49374 hypothetical protein               K10755     349      211     0.272      265     
syf:Synpcc7942_0912 DNA polymerase III, tau subunit     K02343     652      205     0.251      359     
hma:rrnAC2565 replication factor C small subunit        K04801     345      205     0.259      313     
syc:syc0630_c DNA polymerase III gamma and tau subunits K02343     652      205     0.251      359     
rpr:RP865 DNA POLYMERASE III SUBUNITS GAMMA AND TAU (dn K02343     541      200     0.254      264     
ape:APE_1524.1 replication factor C large subunit       K04800     479      199     0.263      224     
syn:sll0613 Holliday junction DNA helicase; RuvB        K03551     361      198     0.277      264     
tko:TK2219 replication factor C, large subunit          K04800     499      197     0.247      223     
osa:4336704 replication factor C subunit 4              K10755     335      195     0.247      283     
zma:100282678 uncharacterized protein LOC100282678      K10755     331      194     0.269      212     
tel:tll2253 Holliday junction DNA helicase              K03551     363      194     0.284      229     
ctb:CTL0296 Holliday junction ATP-dependent DNA helicas K03551     334      192     0.285      242     
ctr:CT_040 Holliday junction DNA helicase RuvB          K03551     334      192     0.285      242     
cre:CHLRE_07g337150v5 uncharacterized protein           K10755     340      191     0.238      282     
mmp:MMP0322 replication factor C, large subunit         K04800     486      191     0.248      270     
ana:all2894 Holliday junction DNA helicase              K03551     366      191     0.260      246     
tps:THAPSDRAFT_8830 replication factor C 37 KD subunit  K10755     336      189     0.273      209     
npu:Npun_F4406 Holliday junction DNA helicase RuvB      K03551     366      189     0.282      252     
dme:Dmel_CG5313 replication factor C subunit 3          K10756     332      185     0.242      277     
pfu:PF0092 replication factor C, large subunit          K04800     479      182     0.229      301     
mpn:MPN_536 Holliday junction DNA helicase RuvB         K03551     307      182     0.325      120     
mja:MJ_0884 activator 1 (replication factor C), 53 KD s K04800     516      181     0.242      297     
cpn:CPn_0390 Holliday Junction Helicase                 K03551     337      180     0.276      243     
tpa:TP_0549 ATPase (clpC)                               K03696     814      177     0.244      409     
cel:CELE_F58F6.4 Replication factor C subunit 2         K10755     334      176     0.246      280     
hth:HTH_0431 DNA polymerase III gamma/tau subunit       K02343     483      174     0.239      264     
sso:SSO0769 Activator 1, replication factor C (RFC) lar K04800     405      172     0.228      276     
nmr:Nmar_0270 AAA ATPase central domain protein         K04800     385      170     0.245      229     
mge:MG_359 Holliday junction DNA helicase RuvB          K03551     307      170     0.300      120     
bbu:BB_0834 ATP-dependent Clp protease, subunit C       K03696     739      169     0.272      180     
tbr:Tb11.01.1310 replication factor C subunit 4         K10755     341      166     0.238      340     
pai:PAE1646 replication factor C small subunit          K04801     319      166     0.218      293     
hvo:HVO_0203 replication factor C small subunit         K04801     327      164     0.233      279     
aae:aq_1855 DNA polymerase III gamma subunit            K02343     473      164     0.201      378     
buc:BU481 DNA polymerase III subunits gamma and tau     K02343     361      160     0.217      281     
afu:AF_1195 activator 1, replication factor C, 53 KD su K04800     479      159     0.206      281     
tac:Ta1500 probable replication factor C, 40 KD subunit K04801     330      155     0.232      293     
lma:LMJF_36_1370 putative Transitional endoplasmic reti K13525     784      149     0.277      148     
hal:VNG_2280G replication factor C small subunit        K04801     322      148     0.239      289     
mba:Mbar_A1582 replication factor C small subunit       K04801     334      140     0.233      210     
hit:NTHI1397 ABC-type transport system, ATPase componen K19230     269      107     0.205      254     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]