GFIT result for
rmn
|
GFIT result for
rmn
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rmn:TK49_14525 (827 a.a.) |
-- |
K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rwe:KOL96_18330(830) | 833 | 94.6 | 4928 | 9 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpi:Rpic_2420(829) | 833 | 94.4 | 4904 | 8 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpf:Rpic12D_2027(821) | 824 | 95.0 | 4893 | 9 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsl:RPSI07_1208(876) | 829 | 92.6 | 4868 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsc:RCFBP_11179(873) | 829 | 92.4 | 4833 | 8 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsn:RSPO_c01215(873) | 829 | 92.3 | 4817 | 13 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsy:RSUY_12400(873) | 829 | 92.3 | 4817 | 13 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpu:CDC45_11305(828) | 831 | 92.1 | 4813 | 6 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsg:JK151_08480(838) | 829 | 91.9 | 4804 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rnc:GO999_05790(828) | 831 | 91.9 | 4801 | 8 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rse:F504_2174(819) | 820 | 92.1 | 4763 | 9 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsm:CMR15_11163(777) | 781 | 93.0 | 4553 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rso:RSc2215(755) | 758 | 92.9 | 4447 | 8 | -> | K03086 | rpoD | rpoD; probable rna polymerase sigma d (sigma-70) factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 845 | 80.2 | 4151 | 13 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rme:Rmet_2606(855) | 843 | 80.3 | 4150 | 12 | -> | K03086 | rpoD | rpoD1; RNA polymerase sigma D factor (housekeeping sigma factor); K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 849 | 80.4 | 4127 | 16 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 839 | 81.0 | 4115 | 19 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuk:KB879_25560(850) | 848 | 80.0 | 4113 | 20 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 829 | 80.5 | 4088 | 13 | -> | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 846 | 79.7 | 4087 | 14 | -> | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 772 | 85.8 | 4078 | 0 | -- | - | |||
| > reu:Reut_A0888(783) | 801 | 82.8 | 4075 | 25 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rin:ACS15_0956(666) | 668 | 95.7 | 4064 | 5 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccup:BKK81_15305(744) | 771 | 85.0 | 4033 | 4 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 771 | 85.0 | 4033 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuu:BKK79_16695(744) | 771 | 85.0 | 4033 | 7 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cbw:RR42_m3043(827) | 841 | 79.9 | 4031 | 20 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cgd:CR3_1956(750) | 767 | 84.9 | 4008 | 11 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccax:KZ686_14540(750) | 767 | 84.6 | 3998 | 12 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccam:M5D45_12045(684) | 687 | 90.2 | 3878 | 3 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cti:RALTA_A2226(683) | 686 | 90.2 | 3868 | 4 | -> | K03086 | rpoD | rpoD1; RNA POLYMERASE SIGMA D (SIGMA-70) FACTOR TRANSCRIPTION REGULATOR PROTEIN; K03086 RNA polymerase primary sigma factor | |
| > cnc:CNE_1c26220(684) | 687 | 88.5 | 3841 | 7 | -> | K03086 | rpoD | rpoD2; DNA-directed RNA polymerase sigma subunit RpoD; K03086 RNA polymerase primary sigma factor | |
| > ptx:ABW99_02495(659) | 655 | 85.2 | 3595 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfg:AB870_02870(700) | 699 | 80.7 | 3591 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfib:PI93_012115(789) | 792 | 73.1 | 3582 | 18 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pnr:AT302_16095(700) | 691 | 81.6 | 3567 | 5 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tcar:U0034_27330(?) | 829 | 69.1 | 3567 | 0 | -- | - | |||
| > ppk:U875_08055(691) | 690 | 81.6 | 3564 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppnm:LV28_05550(691) | 690 | 81.6 | 3564 | 3 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > ppno:DA70_00765(691) | 690 | 81.6 | 3564 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > prb:X636_01570(691) | 690 | 81.6 | 3564 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspu:NA29_12205(701) | 699 | 80.4 | 3562 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pand:DRB87_14825(700) | 700 | 80.9 | 3560 | 5 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppul:RO07_24500(699) | 702 | 80.2 | 3558 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > para:BTO02_20190(799) | 793 | 71.2 | 3557 | 12 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pew:KZJ38_35870(800) | 794 | 71.3 | 3557 | 13 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > brh:RBRH_01153(778) | 741 | 75.2 | 3544 | 2 | -> | K03086 | rpoD | RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 811 | 70.7 | 3542 | 47 | -> | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 811 | 70.7 | 3542 | 50 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcom:NTU39_17520(701) | 700 | 79.9 | 3542 | 2 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgp:CUJ91_31075(807) | 819 | 69.6 | 3541 | 10 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bte:BTH_II0621(800) | 803 | 70.7 | 3539 | 43 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pve:UC34_15945(676) | 666 | 83.2 | 3538 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgl:bglu_2g15870(805) | 820 | 69.5 | 3536 | 24 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pox:MB84_20810(662) | 656 | 84.0 | 3535 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pts:CUJ90_24685(799) | 798 | 70.9 | 3535 | 15 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgd:bgla_2g21200(805) | 801 | 71.2 | 3534 | 19 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD family protein; K03086 RNA polymerase primary sigma factor | |
| > bpm:BURPS1710b_A0833(800) | 804 | 70.4 | 3534 | 89 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bac:BamMC406_3783(805) | 803 | 70.2 | 3533 | 30 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bam:Bamb_3257(805) | 805 | 70.6 | 3533 | 36 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 811 | 71.4 | 3533 | 17 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bch:Bcen2424_3886(805) | 807 | 69.8 | 3532 | 29 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgp:BGL_2c21380(805) | 802 | 70.2 | 3530 | 23 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > bpla:bpln_2g21580(805) | 802 | 70.2 | 3530 | 28 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > burk:DM992_30230(805) | 811 | 70.2 | 3528 | 30 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > papi:SG18_23815(698) | 698 | 79.9 | 3528 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 817 | 69.9 | 3528 | 0 | -- | - | |||
| > bur:Bcep18194_B2204(808) | 813 | 70.0 | 3527 | 31 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacs:FAZ98_17775(798) | 808 | 70.3 | 3526 | 13 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 800 | 70.6 | 3525 | 8 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspw:BJG93_20670(796) | 806 | 70.5 | 3525 | 13 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bvi:Bcep1808_4264(809) | 804 | 70.3 | 3522 | 39 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgf:BC1003_4533(803) | 810 | 70.6 | 3520 | 9 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bann:JFN94_22185(805) | 811 | 70.0 | 3516 | 30 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ptro:G5S35_22580(802) | 807 | 70.1 | 3516 | 16 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 811 | 69.5 | 3514 | 0 | -- | - | |||
| > pacp:FAZ97_21915(802) | 797 | 70.3 | 3512 | 7 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pbry:NDK50_35105(797) | 807 | 70.5 | 3511 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmv:BMASAVP1_1520(736) | 739 | 74.3 | 3510 | 9 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpl:BURPS1106A_A2384(736) | 739 | 74.3 | 3510 | 9 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcj:CUJ87_26830(803) | 807 | 70.5 | 3509 | 11 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpd:BURPS668_A2525(736) | 739 | 74.2 | 3508 | 11 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pter:C2L65_28295(796) | 792 | 70.6 | 3508 | 9 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > phs:C2L64_31560(799) | 795 | 70.6 | 3507 | 9 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > parb:CJU94_29570(800) | 804 | 69.5 | 3506 | 10 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bari:NLX30_33875(805) | 807 | 69.3 | 3504 | 34 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bui:AX768_23275(822) | 825 | 69.3 | 3502 | 5 | -> | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bum:AXG89_20365(822) | 825 | 69.3 | 3502 | 4 | -> | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > pkf:RW095_16445(?) | 807 | 70.5 | 3501 | 0 | -- | - | |||
| > ppai:E1956_15675(?) | 807 | 69.5 | 3481 | 0 | -- | - | |||
| > caba:SBC2_56960(873) | 845 | 66.7 | 3477 | 5 | -> | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bhg:I6G56_26350(680) | 685 | 78.5 | 3470 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > btd:BTI_5230(680) | 685 | 78.5 | 3470 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bud:AQ610_28865(680) | 685 | 78.5 | 3470 | 4 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bul:BW21_4852(680) | 685 | 78.5 | 3470 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bge:BC1002_5279(680) | 684 | 79.4 | 3469 | 5 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > buu:WS70_26195(680) | 684 | 78.7 | 3465 | 4 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bma:BMAA0339(680) | 685 | 78.5 | 3464 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmab:BM45_4198(680) | 685 | 78.5 | 3464 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmae:DM78_4339(680) | 685 | 78.5 | 3464 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |