GFIT result for
cpau
|
GFIT result for
cpau
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| cpau:EHF44_09980 (856 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rme:Rmet_2606(855) | 857 | 95.7 | 5148 | 12 | <- | K03086 | rpoD | rpoD1; RNA polymerase sigma D factor (housekeeping sigma factor); K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 859 | 90.2 | 4815 | 16 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuk:KB879_25560(850) | 859 | 90.5 | 4810 | 20 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 858 | 89.5 | 4750 | 19 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 859 | 89.4 | 4750 | 14 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 832 | 90.7 | 4697 | 13 | <- | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 786 | 91.1 | 4514 | 25 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 762 | 93.0 | 4465 | 0 | -- | - | |||
| > cbw:RR42_m3043(827) | 832 | 85.8 | 4434 | 20 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccax:KZ686_14540(750) | 757 | 91.3 | 4323 | 12 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cgd:CR3_1956(750) | 757 | 91.1 | 4320 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccup:BKK81_15305(744) | 761 | 88.4 | 4212 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 761 | 88.4 | 4212 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuu:BKK79_16695(744) | 761 | 88.4 | 4212 | 7 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 845 | 80.2 | 4151 | 16 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > rwe:KOL96_18330(830) | 844 | 79.9 | 4130 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpi:Rpic_2420(829) | 844 | 80.0 | 4127 | 8 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpf:Rpic12D_2027(821) | 839 | 80.3 | 4119 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsc:RCFBP_11179(873) | 885 | 76.8 | 4114 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsl:RPSI07_1208(876) | 886 | 75.7 | 4107 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsn:RSPO_c01215(873) | 885 | 76.7 | 4096 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsy:RSUY_12400(873) | 885 | 76.7 | 4096 | 13 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpu:CDC45_11305(828) | 848 | 78.9 | 4086 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cti:RALTA_A2226(683) | 687 | 94.3 | 4083 | 4 | <- | K03086 | rpoD | rpoD1; RNA POLYMERASE SIGMA D (SIGMA-70) FACTOR TRANSCRIPTION REGULATOR PROTEIN; K03086 RNA polymerase primary sigma factor | |
| > ccam:M5D45_12045(684) | 687 | 93.7 | 4076 | 3 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rnc:GO999_05790(828) | 848 | 78.8 | 4074 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsg:JK151_08480(838) | 847 | 79.0 | 4073 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rse:F504_2174(819) | 834 | 79.6 | 4066 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnc:CNE_1c26220(684) | 687 | 93.3 | 4054 | 7 | <- | K03086 | rpoD | rpoD2; DNA-directed RNA polymerase sigma subunit RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsm:CMR15_11163(777) | 792 | 82.8 | 4052 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rso:RSc2215(755) | 764 | 83.6 | 3988 | 8 | <- | K03086 | rpoD | rpoD; probable rna polymerase sigma d (sigma-70) factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > rin:ACS15_0956(666) | 675 | 89.9 | 3820 | 5 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfib:PI93_012115(789) | 797 | 72.8 | 3600 | 18 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pnr:AT302_16095(700) | 698 | 80.9 | 3563 | 5 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppul:RO07_24500(699) | 709 | 80.0 | 3561 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppk:U875_08055(691) | 701 | 80.6 | 3560 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppnm:LV28_05550(691) | 701 | 80.6 | 3560 | 3 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > ppno:DA70_00765(691) | 701 | 80.6 | 3560 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > prb:X636_01570(691) | 701 | 80.6 | 3560 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ptx:ABW99_02495(659) | 657 | 84.2 | 3558 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfg:AB870_02870(700) | 708 | 79.4 | 3544 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pand:DRB87_14825(700) | 699 | 80.1 | 3541 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspu:NA29_12205(701) | 709 | 79.4 | 3538 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcom:NTU39_17520(701) | 715 | 79.2 | 3524 | 2 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bur:Bcep18194_B2204(808) | 812 | 69.7 | 3522 | 31 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > papi:SG18_23815(698) | 710 | 78.7 | 3519 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgp:CUJ91_31075(807) | 810 | 70.0 | 3518 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pew:KZJ38_35870(800) | 805 | 69.7 | 3516 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pve:UC34_15945(676) | 673 | 82.0 | 3516 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpm:BURPS1710b_A0833(800) | 830 | 68.8 | 3514 | 89 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pox:MB84_20810(662) | 663 | 83.1 | 3514 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bte:BTH_II0621(800) | 816 | 69.4 | 3510 | 43 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bch:Bcen2424_3886(805) | 811 | 69.5 | 3508 | 29 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > para:BTO02_20190(799) | 804 | 70.3 | 3506 | 12 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tcar:U0034_27330(?) | 833 | 68.5 | 3506 | 0 | -- | - | |||
| > bam:Bamb_3257(805) | 810 | 69.6 | 3500 | 36 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 812 | 69.2 | 3500 | 47 | <- | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 812 | 69.2 | 3500 | 50 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > burk:DM992_30230(805) | 811 | 69.3 | 3499 | 30 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > parb:CJU94_29570(800) | 809 | 70.3 | 3498 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bac:BamMC406_3783(805) | 810 | 69.5 | 3497 | 30 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pts:CUJ90_24685(799) | 803 | 70.9 | 3497 | 15 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bann:JFN94_22185(805) | 810 | 69.5 | 3493 | 30 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgf:BC1003_4533(803) | 820 | 69.6 | 3493 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 836 | 70.0 | 3490 | 17 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 812 | 69.3 | 3489 | 0 | -- | - | |||
| > bgl:bglu_2g15870(805) | 809 | 68.9 | 3489 | 24 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pbry:NDK50_35105(797) | 806 | 70.3 | 3489 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > brh:RBRH_01153(778) | 746 | 74.4 | 3487 | 2 | <- | K03086 | rpoD | RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor | |
| > caba:SBC2_56960(873) | 844 | 67.1 | 3487 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pter:C2L65_28295(796) | 807 | 70.4 | 3486 | 9 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgp:BGL_2c21380(805) | 820 | 68.7 | 3485 | 23 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > bpla:bpln_2g21580(805) | 820 | 68.7 | 3485 | 28 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaj:EKL02_16165(860) | 858 | 66.7 | 3485 | 22 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bvi:Bcep1808_4264(809) | 812 | 68.7 | 3483 | 39 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 812 | 70.6 | 3483 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bari:NLX30_33875(805) | 811 | 69.1 | 3480 | 34 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcj:CUJ87_26830(803) | 812 | 70.1 | 3479 | 11 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgd:bgla_2g21200(805) | 813 | 69.5 | 3478 | 19 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD family protein; K03086 RNA polymerase primary sigma factor | |
| > pspw:BJG93_20670(796) | 806 | 70.5 | 3477 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ptro:G5S35_22580(802) | 804 | 68.7 | 3477 | 16 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 826 | 68.8 | 3474 | 0 | -- | - | |||
| > pacp:FAZ97_21915(802) | 801 | 69.5 | 3473 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > phs:C2L64_31560(799) | 803 | 70.4 | 3473 | 9 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pkf:RW095_16445(?) | 820 | 69.3 | 3471 | 0 | -- | - | |||
| > bui:AX768_23275(822) | 824 | 68.4 | 3469 | 5 | <- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bum:AXG89_20365(822) | 824 | 68.4 | 3469 | 4 | <- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bmv:BMASAVP1_1520(736) | 743 | 73.9 | 3465 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpl:BURPS1106A_A2384(736) | 743 | 73.9 | 3465 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > nok:FAY22_00380(827) | 835 | 66.9 | 3461 | 27 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpd:BURPS668_A2525(736) | 743 | 73.9 | 3460 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hfr:G5S34_04260(850) | 856 | 65.7 | 3459 | 25 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 864 | 66.3 | 3456 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hse:Hsero_0870(850) | 859 | 65.2 | 3454 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 859 | 65.2 | 3454 | 24 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > pbon:QS306_09525(?) | 751 | 73.8 | 3452 | 0 | -- | - | |||
| > pacs:FAZ98_17775(798) | 807 | 68.8 | 3450 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cfu:CFU_1025(831) | 846 | 65.6 | 3448 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > hhf:E2K99_04215(850) | 864 | 65.9 | 3442 | 26 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > buo:BRPE64_BCDS12030(686) | 685 | 77.7 | 3434 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |